README.md
setup.py
bin/microbeannotator
bin/microbeannotator_db_builder
microbeannotator/__init__.py
microbeannotator.egg-info/PKG-INFO
microbeannotator.egg-info/SOURCES.txt
microbeannotator.egg-info/dependency_links.txt
microbeannotator.egg-info/top_level.txt
microbeannotator/data/__init__.py
microbeannotator/data/kegg_orthology_parser.py
microbeannotator/database/__init__.py
microbeannotator/database/conversion_database_creator.py
microbeannotator/database/kofam_profile_parser.py
microbeannotator/database/protein_db_creation.py
microbeannotator/database/refseq_data_downloader.py
microbeannotator/database/refseq_genbank_parser.py
microbeannotator/database/sqlite3_database_builder.py
microbeannotator/database/uniprot_dat_parser.py
microbeannotator/database/uniprot_data_downloader.py
microbeannotator/pipeline/__init__.py
microbeannotator/pipeline/hmmsearch.py
microbeannotator/pipeline/identifier_conversion.py
microbeannotator/pipeline/ko_mapper.py
microbeannotator/pipeline/protein_search.py
microbeannotator/pipeline/sqlite3_search.py
microbeannotator/utilities/__init__.py
microbeannotator/utilities/core_utils.py
microbeannotator/utilities/fasta_filter_list.py
microbeannotator/utilities/logging.py