{
  "model": "dnabert2",
  "experiment": "synthetic_covariation_control",
  "timestamp": "20260715_131418",
  "results": {
    "per_rna": {
      "5S_rRNA_ecoli_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "5S_rRNA_ecoli_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "5S_rRNA_ecoli_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "5S_rRNA_ecoli_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "5S_rRNA_ecoli_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "6S_RNA_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "6S_RNA_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "6S_RNA_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "6S_RNA_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "6S_RNA_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "7SK_RNA_syn0": {
        "best_ps": -0.007221654057502747,
        "best_layer": 0,
        "per_layer_ps": [
          -0.007221654057502747
        ],
        "n_eligible_pairs": 41,
        "n_stems": 17,
        "n_wc_pairs_total": 87,
        "positive_control": {
          "pass": false,
          "p_value": 0.05040401294244361,
          "mean_stem_delta": 0.20069005579321386,
          "mean_loop_delta": 0.21820233871297137
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.009576678276062012,
        "ps_au_pairs": -0.00015658140182495117,
        "quarantined": false,
        "null_95th_primary": 0.0,
        "null_95th_conservative": NaN,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "7SK_RNA_syn1": {
        "best_ps": 0.008325159549713135,
        "best_layer": 0,
        "per_layer_ps": [
          0.008325159549713135
        ],
        "n_eligible_pairs": 41,
        "n_stems": 17,
        "n_wc_pairs_total": 87,
        "positive_control": {
          "pass": false,
          "p_value": 0.7323446714504183,
          "mean_stem_delta": 0.17809195288418458,
          "mean_loop_delta": 0.18088366976356118
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": 0.016809046268463135,
        "ps_au_pairs": -0.00015872716903686523,
        "quarantined": false,
        "null_95th_primary": 0.0,
        "null_95th_conservative": NaN,
        "null_available": true,
        "exceeds_null_primary": true,
        "exceeds_null_conservative": false
      },
      "7SK_RNA_syn2": {
        "best_ps": -0.022095173597335815,
        "best_layer": 0,
        "per_layer_ps": [
          -0.022095173597335815
        ],
        "n_eligible_pairs": 41,
        "n_stems": 17,
        "n_wc_pairs_total": 87,
        "positive_control": {
          "pass": false,
          "p_value": 0.3620839366673029,
          "mean_stem_delta": 0.10812708031053858,
          "mean_loop_delta": 0.10351042524958642
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.00011935830116271973,
        "ps_au_pairs": -0.04407098889350891,
        "quarantined": false,
        "null_95th_primary": 0.0,
        "null_95th_conservative": NaN,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "7SK_RNA_syn3": {
        "best_ps": -0.02861306071281433,
        "best_layer": 0,
        "per_layer_ps": [
          -0.02861306071281433
        ],
        "n_eligible_pairs": 41,
        "n_stems": 17,
        "n_wc_pairs_total": 87,
        "positive_control": {
          "pass": false,
          "p_value": 0.2700917459815704,
          "mean_stem_delta": 0.0866277794169638,
          "mean_loop_delta": 0.09875547076703012
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": 3.3795833587646484e-05,
        "ps_au_pairs": -0.038162012894948326,
        "quarantined": false,
        "null_95th_primary": 0.0,
        "null_95th_conservative": NaN,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "7SK_RNA_syn4": {
        "best_ps": -0.0307147353887558,
        "best_layer": 0,
        "per_layer_ps": [
          -0.0307147353887558
        ],
        "n_eligible_pairs": 41,
        "n_stems": 17,
        "n_wc_pairs_total": 87,
        "positive_control": {
          "pass": false,
          "p_value": 5.532552576097264e-06,
          "mean_stem_delta": 0.27554235813695666,
          "mean_loop_delta": 0.3281075877236959
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.05718549092610677,
        "ps_au_pairs": 0.04869753122329712,
        "quarantined": false,
        "null_95th_primary": 0.0,
        "null_95th_conservative": NaN,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Bacterial_SRP_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "Bacterial_SRP_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "Bacterial_SRP_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "Bacterial_SRP_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "Bacterial_SRP_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "CRISPR_leader_syn0": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "CRISPR_leader_syn1": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "CRISPR_leader_syn2": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "CRISPR_leader_syn3": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "CRISPR_leader_syn4": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "Corona_5UTR_syn0": {
        "best_ps": -0.01124087307188246,
        "best_layer": 0,
        "per_layer_ps": [
          -0.01124087307188246
        ],
        "n_eligible_pairs": 49,
        "n_stems": 18,
        "n_wc_pairs_total": 89,
        "positive_control": {
          "pass": false,
          "p_value": 0.18394546666489286,
          "mean_stem_delta": 0.15315895346682964,
          "mean_loop_delta": 0.1616520869488619
        },
        "h3_precision": {
          "fraction": 0.3333333333333333,
          "n": 3,
          "partner_max_count": 1,
          "p_value": 0.7037037037037037
        },
        "ps_gc_pairs": -0.01641387740770976,
        "ps_au_pairs": -0.0008948644002278646,
        "quarantined": false,
        "null_95th_primary": -0.0021016796429951987,
        "null_95th_conservative": -0.0021016796429951987,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Corona_5UTR_syn1": {
        "best_ps": -0.01433420181274414,
        "best_layer": 0,
        "per_layer_ps": [
          -0.01433420181274414
        ],
        "n_eligible_pairs": 49,
        "n_stems": 18,
        "n_wc_pairs_total": 89,
        "positive_control": {
          "pass": false,
          "p_value": 0.03728358762674615,
          "mean_stem_delta": 0.12186832399183373,
          "mean_loop_delta": 0.1356755513571152
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 3,
          "partner_max_count": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.0003180146217346191,
        "ps_au_pairs": -0.03185443580150604,
        "quarantined": false,
        "null_95th_primary": -0.01676144202550252,
        "null_95th_conservative": -0.01676144202550252,
        "null_available": true,
        "exceeds_null_primary": true,
        "exceeds_null_conservative": true
      },
      "Corona_5UTR_syn2": {
        "best_ps": -0.014020019107394747,
        "best_layer": 0,
        "per_layer_ps": [
          -0.014020019107394747
        ],
        "n_eligible_pairs": 49,
        "n_stems": 18,
        "n_wc_pairs_total": 89,
        "positive_control": {
          "pass": false,
          "p_value": 0.6173438785902227,
          "mean_stem_delta": 0.12970409838811306,
          "mean_loop_delta": 0.1327792061586403
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 3,
          "partner_max_count": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -6.824731826782227e-05,
        "ps_au_pairs": -0.015763990581035614,
        "quarantined": false,
        "null_95th_primary": 0.0012378758854336208,
        "null_95th_conservative": 0.0012378758854336208,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Corona_5UTR_syn3": {
        "best_ps": -0.003218140867021349,
        "best_layer": 0,
        "per_layer_ps": [
          -0.003218140867021349
        ],
        "n_eligible_pairs": 49,
        "n_stems": 18,
        "n_wc_pairs_total": 89,
        "positive_control": {
          "pass": false,
          "p_value": 0.0033976923951933623,
          "mean_stem_delta": 0.11739648880905303,
          "mean_loop_delta": 0.1368096630745632
        },
        "h3_precision": {
          "fraction": 0.6666666666666666,
          "n": 3,
          "partner_max_count": 2,
          "p_value": 0.2592592592592592
        },
        "ps_gc_pairs": -0.0074624717235565186,
        "ps_au_pairs": 0.0001773238182067871,
        "quarantined": false,
        "null_95th_primary": 0.003566602865854899,
        "null_95th_conservative": 0.003566602865854899,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Corona_5UTR_syn4": {
        "best_ps": -0.00015998548931545683,
        "best_layer": 0,
        "per_layer_ps": [
          -0.00015998548931545683
        ],
        "n_eligible_pairs": 49,
        "n_stems": 18,
        "n_wc_pairs_total": 89,
        "positive_control": {
          "pass": false,
          "p_value": 0.2733662185306774,
          "mean_stem_delta": 0.14041244846195533,
          "mean_loop_delta": 0.14869726105612152
        },
        "h3_precision": {
          "fraction": 0.3333333333333333,
          "n": 3,
          "partner_max_count": 1,
          "p_value": 0.7037037037037037
        },
        "ps_gc_pairs": -0.0010367929935455322,
        "ps_au_pairs": 9.053094046456473e-05,
        "quarantined": false,
        "null_95th_primary": -0.008423904577891031,
        "null_95th_conservative": -0.008423904577891031,
        "null_available": true,
        "exceeds_null_primary": true,
        "exceeds_null_conservative": true
      },
      "Corona_s2m_syn0": {
        "skipped": true,
        "reason": "< 15 WC pairs (12 found)",
        "n_wc_pairs_total": 12
      },
      "Corona_s2m_syn1": {
        "skipped": true,
        "reason": "< 15 WC pairs (12 found)",
        "n_wc_pairs_total": 12
      },
      "Corona_s2m_syn2": {
        "skipped": true,
        "reason": "< 15 WC pairs (12 found)",
        "n_wc_pairs_total": 12
      },
      "Corona_s2m_syn3": {
        "skipped": true,
        "reason": "< 15 WC pairs (12 found)",
        "n_wc_pairs_total": 12
      },
      "Corona_s2m_syn4": {
        "skipped": true,
        "reason": "< 15 WC pairs (12 found)",
        "n_wc_pairs_total": 12
      },
      "CrPV_IRES_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "CrPV_IRES_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "CrPV_IRES_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "CrPV_IRES_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "CrPV_IRES_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "FMN_riboswitch_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "FMN_riboswitch_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "FMN_riboswitch_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "FMN_riboswitch_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "FMN_riboswitch_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "HDV_ribozyme_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "HDV_ribozyme_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "HDV_ribozyme_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "HDV_ribozyme_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "HDV_ribozyme_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "Hepatitis_C_IRES_III_syn0": {
        "best_ps": -0.026654794812202454,
        "best_layer": 0,
        "per_layer_ps": [
          -0.026654794812202454
        ],
        "n_eligible_pairs": 52,
        "n_stems": 19,
        "n_wc_pairs_total": 101,
        "positive_control": {
          "pass": true,
          "p_value": 0.0017481697479567022,
          "mean_stem_delta": 0.15316790183088658,
          "mean_loop_delta": 0.12296473535098437
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 2,
          "partner_max_count": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.034873783588409424,
        "ps_au_pairs": -0.001997828483581543,
        "quarantined": false,
        "null_95th_primary": -0.01916806399822235,
        "null_95th_conservative": -0.01916806399822235,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Hepatitis_C_IRES_III_syn1": {
        "best_ps": -0.07195426523685455,
        "best_layer": 0,
        "per_layer_ps": [
          -0.07195426523685455
        ],
        "n_eligible_pairs": 52,
        "n_stems": 19,
        "n_wc_pairs_total": 101,
        "positive_control": {
          "pass": true,
          "p_value": 0.018176353872699558,
          "mean_stem_delta": 0.16870577152825664,
          "mean_loop_delta": 0.14724274257714656
        },
        "h3_precision": {
          "fraction": 0.5,
          "n": 2,
          "partner_max_count": 1,
          "p_value": 0.5555555555555556
        },
        "ps_gc_pairs": 0.00016045570373535156,
        "ps_au_pairs": -0.09599250555038452,
        "quarantined": false,
        "null_95th_primary": 0.014012336730957031,
        "null_95th_conservative": 0.014012336730957031,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Hepatitis_C_IRES_III_syn2": {
        "best_ps": -0.026162564754486084,
        "best_layer": 0,
        "per_layer_ps": [
          -0.026162564754486084
        ],
        "n_eligible_pairs": 52,
        "n_stems": 19,
        "n_wc_pairs_total": 101,
        "positive_control": {
          "pass": false,
          "p_value": 0.7059157815477879,
          "mean_stem_delta": 0.11445775500107458,
          "mean_loop_delta": 0.11775560158512968
        },
        "h3_precision": {
          "fraction": 0.5,
          "n": 2,
          "partner_max_count": 1,
          "p_value": 0.5555555555555556
        },
        "ps_gc_pairs": -0.003921031951904297,
        "ps_au_pairs": -0.033576409022013344,
        "quarantined": false,
        "null_95th_primary": 0.0038433223962783813,
        "null_95th_conservative": 0.0038433223962783813,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Hepatitis_C_IRES_III_syn3": {
        "best_ps": -0.007439598441123962,
        "best_layer": 0,
        "per_layer_ps": [
          -0.007439598441123962
        ],
        "n_eligible_pairs": 52,
        "n_stems": 19,
        "n_wc_pairs_total": 101,
        "positive_control": {
          "pass": false,
          "p_value": 0.010476849126227934,
          "mean_stem_delta": 0.1418625046776364,
          "mean_loop_delta": 0.1570937848844371
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 2,
          "partner_max_count": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.007439598441123962,
        "ps_au_pairs": null,
        "quarantined": false,
        "null_95th_primary": -0.004859402775764465,
        "null_95th_conservative": -0.004859402775764465,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Hepatitis_C_IRES_III_syn4": {
        "best_ps": -0.00048576295375823975,
        "best_layer": 0,
        "per_layer_ps": [
          -0.00048576295375823975
        ],
        "n_eligible_pairs": 52,
        "n_stems": 19,
        "n_wc_pairs_total": 101,
        "positive_control": {
          "pass": false,
          "p_value": 0.030094637192969818,
          "mean_stem_delta": 0.08386011566732593,
          "mean_loop_delta": 0.0960472594851103
        },
        "h3_precision": {
          "fraction": 0.0,
          "n": 2,
          "partner_max_count": 0,
          "p_value": 1.0
        },
        "ps_gc_pairs": -0.0005480051040649414,
        "ps_au_pairs": -0.00046501557032267254,
        "quarantined": false,
        "null_95th_primary": 0.0002813786268234253,
        "null_95th_conservative": 0.0002813786268234253,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "Histone_3prime_syn0": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "Histone_3prime_syn1": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "Histone_3prime_syn2": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "Histone_3prime_syn3": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "Histone_3prime_syn4": {
        "skipped": true,
        "reason": "< 15 WC pairs (6 found)",
        "n_wc_pairs_total": 6
      },
      "IRES_HCV_domainII_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRES_HCV_domainII_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRES_HCV_domainII_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRES_HCV_domainII_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRES_HCV_domainII_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRE_stem_loop_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRE_stem_loop_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRE_stem_loop_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRE_stem_loop_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "IRE_stem_loop_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      },
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        "exceeds_null_conservative": false
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          "p_value": 0.7037037037037037
        },
        "ps_gc_pairs": -0.00015816092491149902,
        "ps_au_pairs": -0.04625441630681356,
        "quarantined": false,
        "null_95th_primary": -0.011381494998931884,
        "null_95th_conservative": -0.011381494998931884,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "tmRNA_syn4": {
        "best_ps": -0.0009911417961120605,
        "best_layer": 0,
        "per_layer_ps": [
          -0.0009911417961120605
        ],
        "n_eligible_pairs": 68,
        "n_stems": 12,
        "n_wc_pairs_total": 93,
        "positive_control": {
          "pass": false,
          "p_value": 0.1990854099898054,
          "mean_stem_delta": 0.0675435502106259,
          "mean_loop_delta": 0.07592759166517145
        },
        "h3_precision": {
          "fraction": 0.3333333333333333,
          "n": 3,
          "partner_max_count": 1,
          "p_value": 0.7037037037037037
        },
        "ps_gc_pairs": null,
        "ps_au_pairs": -0.0009911417961120605,
        "quarantined": false,
        "null_95th_primary": 5.3369998931884764e-05,
        "null_95th_conservative": 5.3369998931884764e-05,
        "null_available": true,
        "exceeds_null_primary": false,
        "exceeds_null_conservative": false
      },
      "twister_ribozyme_syn0": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "twister_ribozyme_syn1": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "twister_ribozyme_syn2": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "twister_ribozyme_syn3": {
        "skipped": true,
        "reason": "no valid PS values"
      },
      "twister_ribozyme_syn4": {
        "skipped": true,
        "reason": "no valid PS values"
      }
    },
    "mean_best_ps": -0.0493045300245285,
    "median_best_ps": -0.0493045300245285,
    "families_exceeding_null_primary": 0,
    "families_exceeding_null_conservative": 0,
    "families_no_null": [],
    "families_total": 2,
    "families_quarantined": [],
    "families_skipped": [
      "5S_rRNA_ecoli_syn0",
      "5S_rRNA_ecoli_syn1",
      "5S_rRNA_ecoli_syn2",
      "5S_rRNA_ecoli_syn3",
      "5S_rRNA_ecoli_syn4",
      "6S_RNA_syn0",
      "6S_RNA_syn1",
      "6S_RNA_syn2",
      "6S_RNA_syn3",
      "6S_RNA_syn4",
      "Bacterial_SRP_syn0",
      "Bacterial_SRP_syn1",
      "Bacterial_SRP_syn2",
      "Bacterial_SRP_syn3",
      "Bacterial_SRP_syn4",
      "CRISPR_leader_syn0",
      "CRISPR_leader_syn1",
      "CRISPR_leader_syn2",
      "CRISPR_leader_syn3",
      "CRISPR_leader_syn4",
      "Corona_s2m_syn0",
      "Corona_s2m_syn1",
      "Corona_s2m_syn2",
      "Corona_s2m_syn3",
      "Corona_s2m_syn4",
      "CrPV_IRES_syn0",
      "CrPV_IRES_syn1",
      "CrPV_IRES_syn2",
      "CrPV_IRES_syn3",
      "CrPV_IRES_syn4",
      "FMN_riboswitch_syn0",
      "FMN_riboswitch_syn1",
      "FMN_riboswitch_syn2",
      "FMN_riboswitch_syn3",
      "FMN_riboswitch_syn4",
      "HDV_ribozyme_syn0",
      "HDV_ribozyme_syn1",
      "HDV_ribozyme_syn2",
      "HDV_ribozyme_syn3",
      "HDV_ribozyme_syn4",
      "Histone_3prime_syn0",
      "Histone_3prime_syn1",
      "Histone_3prime_syn2",
      "Histone_3prime_syn3",
      "Histone_3prime_syn4",
      "IRES_HCV_domainII_syn0",
      "IRES_HCV_domainII_syn1",
      "IRES_HCV_domainII_syn2",
      "IRES_HCV_domainII_syn3",
      "IRES_HCV_domainII_syn4",
      "IRE_stem_loop_syn0",
      "IRE_stem_loop_syn1",
      "IRE_stem_loop_syn2",
      "IRE_stem_loop_syn3",
      "IRE_stem_loop_syn4",
      "RNaseP_specificity_syn0",
      "RNaseP_specificity_syn1",
      "RNaseP_specificity_syn2",
      "RNaseP_specificity_syn3",
      "RNaseP_specificity_syn4",
      "SAH_riboswitch_syn0",
      "SAH_riboswitch_syn1",
      "SAH_riboswitch_syn2",
      "SAH_riboswitch_syn3",
      "SAH_riboswitch_syn4",
      "SAM_riboswitch_syn1",
      "SAM_riboswitch_syn3",
      "SECIS_element_syn0",
      "SECIS_element_syn1",
      "SECIS_element_syn2",
      "SECIS_element_syn3",
      "SECIS_element_syn4",
      "SRP_RNA_helix8_syn0",
      "SRP_RNA_helix8_syn1",
      "SRP_RNA_helix8_syn2",
      "SRP_RNA_helix8_syn3",
      "SRP_RNA_helix8_syn4",
      "THF_riboswitch_syn0",
      "THF_riboswitch_syn1",
      "THF_riboswitch_syn2",
      "THF_riboswitch_syn3",
      "THF_riboswitch_syn4",
      "TPP_riboswitch_syn0",
      "TPP_riboswitch_syn1",
      "TPP_riboswitch_syn2",
      "TPP_riboswitch_syn3",
      "TPP_riboswitch_syn4",
      "T_box_leader_syn0",
      "T_box_leader_syn1",
      "T_box_leader_syn2",
      "T_box_leader_syn3",
      "T_box_leader_syn4",
      "U1_snRNA_syn0",
      "U1_snRNA_syn1",
      "U1_snRNA_syn2",
      "U1_snRNA_syn3",
      "U1_snRNA_syn4",
      "U2_snRNA_stem_syn0",
      "U2_snRNA_stem_syn1",
      "U2_snRNA_stem_syn2",
      "U2_snRNA_stem_syn3",
      "U2_snRNA_stem_syn4",
      "U4_snRNA_syn0",
      "U4_snRNA_syn1",
      "U4_snRNA_syn2",
      "U4_snRNA_syn3",
      "U4_snRNA_syn4",
      "U5_snRNA_syn0",
      "U5_snRNA_syn1",
      "U5_snRNA_syn2",
      "U5_snRNA_syn3",
      "U5_snRNA_syn4",
      "U6_snRNA_syn0",
      "U6_snRNA_syn1",
      "U6_snRNA_syn2",
      "U6_snRNA_syn3",
      "U6_snRNA_syn4",
      "Vault_RNA_syn0",
      "Vault_RNA_syn1",
      "Vault_RNA_syn2",
      "Vault_RNA_syn3",
      "Vault_RNA_syn4",
      "Y_RNA_syn0",
      "Y_RNA_syn1",
      "Y_RNA_syn2",
      "Y_RNA_syn3",
      "Y_RNA_syn4",
      "ZMP_riboswitch_syn0",
      "ZMP_riboswitch_syn1",
      "ZMP_riboswitch_syn2",
      "ZMP_riboswitch_syn3",
      "ZMP_riboswitch_syn4",
      "c_di_GMP_riboswitch_syn0",
      "c_di_GMP_riboswitch_syn1",
      "c_di_GMP_riboswitch_syn2",
      "c_di_GMP_riboswitch_syn3",
      "c_di_GMP_riboswitch_syn4",
      "cobalamin_riboswitch_syn1",
      "cobalamin_riboswitch_syn2",
      "fluoride_riboswitch_syn0",
      "fluoride_riboswitch_syn1",
      "fluoride_riboswitch_syn2",
      "fluoride_riboswitch_syn3",
      "fluoride_riboswitch_syn4",
      "glmS_ribozyme_syn0",
      "glmS_ribozyme_syn1",
      "glmS_ribozyme_syn2",
      "glmS_ribozyme_syn3",
      "glmS_ribozyme_syn4",
      "glycine_riboswitch_syn0",
      "glycine_riboswitch_syn1",
      "glycine_riboswitch_syn2",
      "glycine_riboswitch_syn3",
      "glycine_riboswitch_syn4",
      "group_II_intron_D5_syn0",
      "group_II_intron_D5_syn1",
      "group_II_intron_D5_syn2",
      "group_II_intron_D5_syn3",
      "group_II_intron_D5_syn4",
      "hammerhead_ribozyme_syn0",
      "hammerhead_ribozyme_syn1",
      "hammerhead_ribozyme_syn2",
      "hammerhead_ribozyme_syn3",
      "hammerhead_ribozyme_syn4",
      "lysine_riboswitch_syn0",
      "lysine_riboswitch_syn1",
      "lysine_riboswitch_syn2",
      "lysine_riboswitch_syn3",
      "lysine_riboswitch_syn4",
      "manganese_riboswitch_syn0",
      "manganese_riboswitch_syn1",
      "manganese_riboswitch_syn2",
      "manganese_riboswitch_syn3",
      "manganese_riboswitch_syn4",
      "mir_122_precursor_syn0",
      "mir_122_precursor_syn1",
      "mir_122_precursor_syn2",
      "mir_122_precursor_syn3",
      "mir_122_precursor_syn4",
      "mir_155_precursor_syn0",
      "mir_155_precursor_syn1",
      "mir_155_precursor_syn2",
      "mir_155_precursor_syn3",
      "mir_155_precursor_syn4",
      "mir_21_precursor_syn0",
      "mir_21_precursor_syn1",
      "mir_21_precursor_syn2",
      "mir_21_precursor_syn3",
      "mir_21_precursor_syn4",
      "mir_let7_precursor_syn0",
      "mir_let7_precursor_syn1",
      "mir_let7_precursor_syn2",
      "mir_let7_precursor_syn3",
      "mir_let7_precursor_syn4",
      "preQ1_riboswitch_syn0",
      "preQ1_riboswitch_syn1",
      "preQ1_riboswitch_syn2",
      "preQ1_riboswitch_syn3",
      "preQ1_riboswitch_syn4",
      "purine_riboswitch_syn0",
      "purine_riboswitch_syn1",
      "purine_riboswitch_syn2",
      "purine_riboswitch_syn3",
      "purine_riboswitch_syn4",
      "tRNA_Ala_human_syn0",
      "tRNA_Ala_human_syn1",
      "tRNA_Ala_human_syn2",
      "tRNA_Ala_human_syn3",
      "tRNA_Ala_human_syn4",
      "tRNA_Phe_yeast_syn0",
      "tRNA_Phe_yeast_syn1",
      "tRNA_Phe_yeast_syn2",
      "tRNA_Phe_yeast_syn3",
      "tRNA_Phe_yeast_syn4",
      "twister_ribozyme_syn0",
      "twister_ribozyme_syn1",
      "twister_ribozyme_syn2",
      "twister_ribozyme_syn3",
      "twister_ribozyme_syn4"
    ],
    "families_failed_gate": [
      "7SK_RNA_syn0",
      "7SK_RNA_syn1",
      "7SK_RNA_syn2",
      "7SK_RNA_syn3",
      "7SK_RNA_syn4",
      "Corona_5UTR_syn0",
      "Corona_5UTR_syn1",
      "Corona_5UTR_syn2",
      "Corona_5UTR_syn3",
      "Corona_5UTR_syn4",
      "Hepatitis_C_IRES_III_syn2",
      "Hepatitis_C_IRES_III_syn3",
      "Hepatitis_C_IRES_III_syn4",
      "SAM_riboswitch_syn0",
      "SAM_riboswitch_syn2",
      "SAM_riboswitch_syn4",
      "cobalamin_riboswitch_syn0",
      "cobalamin_riboswitch_syn3",
      "cobalamin_riboswitch_syn4",
      "group_I_intron_P4P6_syn0",
      "group_I_intron_P4P6_syn1",
      "group_I_intron_P4P6_syn2",
      "group_I_intron_P4P6_syn3",
      "group_I_intron_P4P6_syn4",
      "hatchet_ribozyme_syn0",
      "hatchet_ribozyme_syn1",
      "hatchet_ribozyme_syn2",
      "hatchet_ribozyme_syn3",
      "hatchet_ribozyme_syn4",
      "pistol_ribozyme_syn0",
      "pistol_ribozyme_syn1",
      "pistol_ribozyme_syn2",
      "pistol_ribozyme_syn3",
      "pistol_ribozyme_syn4",
      "tmRNA_syn0",
      "tmRNA_syn1",
      "tmRNA_syn2",
      "tmRNA_syn3",
      "tmRNA_syn4"
    ]
  },
  "n_synthetic_per_family": 5,
  "seed": 42
}