Index

A

Amplicon (class in pydna.amplify)

Anneal (class in pydna.amplify)

B

basictm() (in module pydna.amplify)

C

circular (pydna.dsdna.Dseq attribute) (pydna.dsdna.Dseqrecord attribute) circular_assembly() (in module pydna.assembly)

copy_features() (in module pydna.utils) cut() (pydna.dsdna.Dseq method) (pydna.dsdna.Dseqrecord method)

D

detailed_figure() (pydna.amplify.Amplicon method) Dseq (class in pydna.dsdna)

Dseqrecord (class in pydna.dsdna)

E

Editor (class in pydna.editor)

eq() (in module pydna.utils)

F

featured_template() (pydna.amplify.Anneal method) fig() (pydna.dsdna.Dseq method) fill_in() (pydna.dsdna.Dseq method) five_prime_end() (pydna.dsdna.Dseq method)

flankdn() (pydna.amplify.Amplicon method) flankup() (pydna.amplify.Amplicon method) format() (pydna.dsdna.Dseqrecord method)

G

Genbank (class in pydna.download)

L

linear (pydna.dsdna.Dseq attribute) (pydna.dsdna.Dseqrecord attribute) linear_assembly() (in module pydna.assembly)

looped() (pydna.dsdna.Dseq method) (pydna.dsdna.Dseqrecord method)

M

mung() (pydna.dsdna.Dseq method)

N

nucleotide() (pydna.download.Genbank method)

O

open() (pydna.editor.Editor method)

ovhg (pydna.dsdna.Dseq attribute)

P

parse() (in module pydna.dsdna) pcr() (in module pydna.amplify) pcr_product() (pydna.amplify.Amplicon method) pcr_program() (pydna.amplify.Amplicon method) products() (pydna.amplify.Anneal method) pydna.amplify (module)

pydna.assembly (module) pydna.download (module) pydna.dsdna (module) pydna.editor (module) pydna.utils (module)

R

rc() (in module pydna.dsdna) (pydna.dsdna.Dseq method) (pydna.dsdna.Dseqrecord method) read() (in module pydna.dsdna)

report() (pydna.amplify.Anneal method) reverse_complement() (pydna.dsdna.Dseq method) (pydna.dsdna.Dseqrecord method)

S

seguid() (pydna.dsdna.Dseqrecord method) shift_origin() (in module pydna.utils) shifted() (pydna.dsdna.Dseqrecord method)

stamp() (pydna.dsdna.Dseqrecord method) sync() (in module pydna.utils) synced() (pydna.dsdna.Dseqrecord method)

T

t4() (pydna.dsdna.Dseq method) T4() (pydna.dsdna.Dseq method) test() (pydna.download.Genbank method) three_prime_end() (pydna.dsdna.Dseq method)

tmbreslauer86() (in module pydna.amplify) tmbresluc() (in module pydna.amplify) tmstaluc98() (in module pydna.amplify) tolinear() (pydna.dsdna.Dseq method) (pydna.dsdna.Dseqrecord method)

V

verify_stamp() (pydna.dsdna.Dseqrecord method)

W

write() (pydna.dsdna.Dseqrecord method)