If '--not_consensus' argument was used, Reads were used instead of UMIs.
UMIs(or Reads) Mapped to Any VDJ Gene : UMIs(or Reads) Mapped to any germline VDJ gene segments.
UMIs(or Reads) with CDR3 : UMIs(or Reads) with CDR3 sequence.
UMIs(or Reads) with Correct CDR3 : some UMIs(or Reads) with CDR3 might have stop codon and these UMIs(or Reads) are classified as incorrect.
UMIs(or Reads) Mapped Confidently to VJ Gene : UMIs(or Reads) mapped to VJ gene pairs and with correct CDR3.
UMIs(or Reads) Mapped to TRA : UMIs(or Reads) mapped confidently to TRA chain.
UMIs(or Reads) Mapped to TRB : UMIs(or Reads) mapped confidently to TRB chain.