SAGE
Web Visualizer
— atoms
Representation
Ball & Stick
Spacefill
Sticks
Points
Atom size
Bond size
Bonds
Cell
Supercell
Color by
Property
Element
Palette
Viridis
Magma
Inferno
Plasma
Turbo
Hot
Grayscale
RdBu
BlueRed
Surfaces & overlays
Molecular surface
Type
van der Waals
Solvent-accessible
Coordination polyhedra
Atom labels
⟳ Reset view
⤓ PNG
Drag rotate · Right/Shift-drag pan · Wheel zoom
Click atoms to measure ·
C
clear ·
Space
play
Use the
Pretty
tab → for looks, materials & effects.
Info
✨ Pretty
Analysis
Structure
Formula
—
Atoms
—
Bonds
—
Energy
—
Frame
—
Select
Go
All
None
Invert
Isolate
Measure
Click atoms to measure distance, angle, dihedral.
One-click Looks
Material
Preset
Lighting
Rig
Tone
Effects
Ambient occlusion
AO strength
1.0
Bloom
Bloom
0.2
Fog
0
Scene outline
Outline
0.8
Background
Color
Export
⤓ PNG (frame)
⤓ PNG frames (.zip)
Movie fps
12
● Record movie
Movie/zip step through every frame of the trajectory.
Radial distribution g(r)
r max (Å)
8
Compute RDF
Interactions
Type
Close contacts
Hydrogen bonds
Cutoff (Å)
3.5
Show overlay
Contacts/H-bonds drawn as cyan lines between atoms.
property
0
1
▶
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