##
## GEMMA Version    = 0.98.5 (2021-08-25)
## Build profile    = /gnu/store/8rvid272yb53bgascf5c468z0jhsyflj-profile
## GCC version      = 4.2.1
## GSL Version      = 2.8
## OpenBlas         = OpenBLAS 0.3.31  - OpenBLAS 0.3.34 DYNAMIC_ARCH NO_AFFINITY USE_OPENMP vortexm4 MAX_THREADS=56
##   arch           = vortexm4
##   threads        = 18
##   parallel type  = openmp
##
## Command Line Input = gemma -g tests/fixtures/bgen_parity/mouse_bgen.geno.txt.gz -p tests/fixtures/bgen_parity/mouse_bgen.pheno.txt -a tests/fixtures/bgen_parity/mouse_bgen.anno.txt -k tests/fixtures/bgen_parity/mouse_bgen_kinship.cXX.txt -lmm 3 -o mouse_bgen_score -outdir tests/fixtures/bgen_parity 
##
## Date = Thu Sep 24 02:36:19 2026
##
## Summary Statistics:
## number of total individuals = 160
## number of analyzed individuals = 94
## number of covariates = 1
## number of phenotypes = 1
## number of total SNPs/var = 1508
## number of analyzed SNPs/var = 1483
## REMLE log-likelihood in the null model = -127.752
## MLE log-likelihood in the null model = -128.252
## pve estimate in the null model = 0.628733
## se(pve) in the null model = 0.171356
## vg estimate in the null model = 2.29723
## ve estimate in the null model = 0.445919
## beta estimate in the null model =   0.150777
## se(beta) =   0.0688754
##
## Computation Time:
## total computation time = 0.00195135 min 
## computation time break down: 
##      time on eigen-decomposition = 0.000139033 min 
##      time on calculating UtX = 0.00128285 min 
##      time on optimization = 2.76e-05 min 
##
