LICENSE
README.md
pyproject.toml
apifish/__init__.py
apifish.egg-info/PKG-INFO
apifish.egg-info/SOURCES.txt
apifish.egg-info/dependency_links.txt
apifish.egg-info/requires.txt
apifish.egg-info/top_level.txt
apifish/filter/__init__.py
apifish/filter/image.py
apifish/filter/mask.py
apifish/filter/spot.py
apifish/filter/tests/__init__.py
apifish/filter/tests/test_image.py
apifish/formatting/__init__.py
apifish/formatting/recipe_manager.py
apifish/formatting/utils.py
apifish/formatting/tests/__init__.py
apifish/formatting/tests/test_recipe_manager.py
apifish/formatting/tests/test_utils.py
apifish/identification/__init__.py
apifish/identification/cell_segmentation.py
apifish/identification/cluster_detection.py
apifish/identification/colocalization.py
apifish/identification/dense_decomposition.py
apifish/identification/mask_postprocess.py
apifish/identification/mask_utils.py
apifish/identification/nuc_segmentation.py
apifish/identification/spot_detection.py
apifish/identification/spot_modeling.py
apifish/identification/spot_utils.py
apifish/identification/tests/__init__.py
apifish/identification/tests/test_cell_segmentation.py
apifish/identification/tests/test_cluster_detection.py
apifish/identification/tests/test_colocalization.py
apifish/identification/tests/test_dense_decomposition.py
apifish/identification/tests/test_mask_postprocess.py
apifish/identification/tests/test_mask_utils.py
apifish/identification/tests/test_nuc_segmentation.py
apifish/identification/tests/test_spot_detection.py
apifish/identification/tests/test_spot_modeling.py
apifish/identification/tests/test_spot_utils.py
apifish/image/__init__.py
apifish/image/augmentation.py
apifish/image/build_image.py
apifish/image/io.py
apifish/image/preprocess.py
apifish/image/projection.py
apifish/image/quality.py
apifish/image/tests/__init__.py
apifish/image/tests/test_augmentation.py
apifish/image/tests/test_build_image.py
apifish/image/tests/test_io.py
apifish/image/tests/test_preprocess.py
apifish/image/tests/test_projection.py
apifish/image/tests/test_quality.py
apifish/matching/__init__.py
apifish/matching/nuclei_cell.py
apifish/matching/tests/__init__.py
apifish/matching/tests/test_nuclei_cell.py
apifish/registration/__init__.py
apifish/visualization/__init__.py
apifish/visualization/plot_images.py
apifish/visualization/plot_quality.py
apifish/visualization/utils.py