AGENTS.md
CHANGELOG.md
CONTRIBUTING.md
CURRENT_HANDOFF.md
LICENSE
MANIFEST.in
README.md
SOURCE_CONTENT_MANIFEST.json
pyproject.toml
run.py
setup.cfg
setup.py
slice-view-roadmap.md
docs/README.md
docs/algorithm.md
docs/architecture.md
docs/gui.md
docs/installation.md
docs/local_real_data_run.md
docs/npy_manifest_guide.md
docs/reproducibility.md
docs/result_storage.md
docs/validation_layout.md
docs/images/image.png
docs/release/plan.md
docs/release/polish-20260910.md
docs/release/uncalibrated-scope.md
src/recip_slice/__init__.py
src/recip_slice/__main__.py
src/recip_slice/_version.py
src/recip_slice/cli.py
src/recip_slice/native.py
src/recip_slice/release_identity.py
src/recip_slice/style.qss
src/recip_slice.egg-info/PKG-INFO
src/recip_slice.egg-info/SOURCES.txt
src/recip_slice.egg-info/dependency_links.txt
src/recip_slice.egg-info/entry_points.txt
src/recip_slice.egg-info/requires.txt
src/recip_slice.egg-info/top_level.txt
src/recip_slice/assets/chevron-down-disabled.svg
src/recip_slice/assets/chevron-down.svg
src/recip_slice/assets/chevron-up-disabled.svg
src/recip_slice/assets/chevron-up.svg
src/recip_slice/core/__init__.py
src/recip_slice/core/calibration.py
src/recip_slice/core/common.py
src/recip_slice/core/dataset.py
src/recip_slice/core/frame_preview.py
src/recip_slice/core/geometry.py
src/recip_slice/core/geometry_models.py
src/recip_slice/core/geometry_planes.py
src/recip_slice/core/geometry_transform.py
src/recip_slice/core/geometry_xds.py
src/recip_slice/core/job_queue.py
src/recip_slice/core/options.py
src/recip_slice/core/preflight.py
src/recip_slice/core/project.py
src/recip_slice/core/resources.py
src/recip_slice/core/result_management.py
src/recip_slice/core/settings.py
src/recip_slice/core/validation.py
src/recip_slice/core/workflow.py
src/recip_slice/gui/__init__.py
src/recip_slice/gui/canvas.py
src/recip_slice/gui/helpers.py
src/recip_slice/gui/result_loading.py
src/recip_slice/gui/result_status.py
src/recip_slice/gui/viewer.py
src/recip_slice/gui/window.py
src/recip_slice/gui/window_comparison.py
src/recip_slice/gui/window_comparison_appearance.py
src/recip_slice/gui/window_comparison_data.py
src/recip_slice/gui/window_comparison_process.py
src/recip_slice/gui/window_dataset.py
src/recip_slice/gui/window_dependencies.py
src/recip_slice/gui/window_display.py
src/recip_slice/gui/window_display_comparison_view.py
src/recip_slice/gui/window_display_view.py
src/recip_slice/gui/window_interaction.py
src/recip_slice/gui/window_layout.py
src/recip_slice/gui/window_layout_sidebar.py
src/recip_slice/gui/window_layout_viewer.py
src/recip_slice/gui/window_measurement.py
src/recip_slice/gui/window_measurement_capture.py
src/recip_slice/gui/window_measurement_data.py
src/recip_slice/gui/window_measurement_dialog.py
src/recip_slice/gui/window_measurement_interaction.py
src/recip_slice/gui/window_process.py
src/recip_slice/gui/window_queue.py
src/recip_slice/gui/window_results.py
src/recip_slice/gui/window_state.py
src/recip_slice/gui/window_state_dataset.py
src/recip_slice/gui/window_state_project.py
src/recip_slice/gui/window_state_results.py
src/recip_slice/gui/window_state_ui.py
src/recip_slice/gui/window_widgets.py
src/recip_slice/reconstruction/__init__.py
src/recip_slice/reconstruction/_accum_ext.c
src/recip_slice/reconstruction/_accum_ext.pyx
src/recip_slice/reconstruction/comparison.py
src/recip_slice/reconstruction/measurement_masks.py
src/recip_slice/reconstruction/measurement_profiles.py
src/recip_slice/reconstruction/measurement_records.py
src/recip_slice/reconstruction/measurement_regions.py
src/recip_slice/reconstruction/measurements.py
src/recip_slice/reconstruction/physical.py
src/recip_slice/reconstruction/physical_background.py
src/recip_slice/reconstruction/physical_io.py
src/recip_slice/reconstruction/physical_native.py
src/recip_slice/reconstruction/physical_pipeline.py
src/recip_slice/reconstruction/physical_sampling.py
src/recip_slice/reconstruction/physical_tasks.py
src/recip_slice/reconstruction/pipeline_context.py
src/recip_slice/reconstruction/pipeline_finalize.py
src/recip_slice/reconstruction/pipeline_frames.py
src/recip_slice/reconstruction/pipeline_geometry.py
src/recip_slice/reconstruction/pipeline_prepare.py
src/recip_slice/reconstruction/pipeline_setup.py
src/recip_slice/reconstruction/pipeline_sparse_frame.py
src/recip_slice/reconstruction/result_contract.py
src/recip_slice/reconstruction/result_discovery.py
src/recip_slice/reconstruction/result_display.py
src/recip_slice/reconstruction/result_geometry.py
src/recip_slice/reconstruction/result_io.py
src/recip_slice/reconstruction/result_types.py
src/recip_slice/reconstruction/results.py
src/recip_slice/reconstruction/rotation_screen.py
src/recip_slice/reconstruction/storage.py
src/recip_slice/reconstruction/view.py
src/recip_slice/science/__init__.py
src/recip_slice/science/detector.py
src/recip_slice/science/fixed.py
src/recip_slice/science/geometry.py
src/recip_slice/science/measure.py
src/recip_slice/science/pattern_cache.py
src/recip_slice/science/products.py
src/recip_slice/science/quadrature.py
src/recip_slice/science/stability.py
src/recip_slice/science/storage.py
src/recip_slice/science/support.py
src/recip_slice/science/volume.py
tests/__init__.py
tests/conftest.py
tests/support.py
tests/test_banding_diagnostic_tool.py
tests/test_calibration.py
tests/test_cli.py
tests/test_cmos_background_split.py
tests/test_comparison.py
tests/test_custom_planes.py
tests/test_dataset.py
tests/test_detector_model.py
tests/test_display_invariants.py
tests/test_evidence_storage.py
tests/test_finite_cell_geometry.py
tests/test_fixed_patterns.py
tests/test_frame_preview.py
tests/test_geometry_support_closure.py
tests/test_gui_dataset_workflow.py
tests/test_gui_plane_loading.py
tests/test_gui_project_analysis.py
tests/test_gui_release_alignment.py
tests/test_gui_results_workflow.py
tests/test_gui_surface.py
tests/test_headless_imports.py
tests/test_job_queue.py
tests/test_local_real_data_runner.py
tests/test_maintenance_contract.py
tests/test_measurements.py
tests/test_module_boundaries.py
tests/test_native_compatibility.py
tests/test_physical_intensity_forward_model.py
tests/test_preflight.py
tests/test_project.py
tests/test_project_cycle.py
tests/test_quantitative_measure.py
tests/test_reconstruction.py
tests/test_release_science_audit.py
tests/test_release_validator.py
tests/test_result_loading_optional.py
tests/test_result_management.py
tests/test_results.py
tests/test_rotation_screen.py
tests/test_science_core_quadrature.py
tests/test_science_core_volume.py
tests/test_science_integration.py
tests/test_settings.py
tests/test_sparse_block_screen.py
tests/test_spot_validation.py
tests/test_subset_stability.py
tests/test_subset_stability_tool.py
tests/test_support_diagnostics.py
tests/test_view_recipe.py
tests/test_workflow.py
tests/test_xds_plan.py
tests/test_zone_pattern_products.py
tools/audit_fine_grid_convergence.py
tools/audit_gui_responsiveness.py
tools/audit_local_science.py
tools/audit_release_science.py
tools/audit_subset_campaign_synthetic.py
tools/audit_subset_stability_synthetic.py
tools/benchmark_cmos_background_synthetic.py
tools/diagnose_banding.py
tools/project_cycle.py
tools/run_local_real_data.py
tools/run_subset_stability.py
tools/validate_release.py
validation/tests/test_fine_grid_convergence.py
validation/tests/test_forward_model_refinement.py
validation/tests/test_geometry_release_validation.py
validation/tests/test_packaging_release.py
validation/tests/test_release_science_tools.py
validation/tests/test_subset_campaign_release.py