DAY-EC activated.
DAY-EC activated.
tmux_sessions:
ccv20260529_simple-test_dryrun: 1 windows (created Fri May 29 19:54:02 2026)
ccv20260529r10_illumina_bclconvert: 1 windows (created Sat May 30 02:22:25 2026)
ccv20260529r10_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 02:19:40 2026)
ccv20260529r10_illumina_run_qc: 1 windows (created Sat May 30 02:22:40 2026)
ccv20260529r10_illumina_run_qc_bclconvert: 1 windows (created Sat May 30 02:22:51 2026)
ccv20260529r10_illumina_run_qc_bclconvert_dryrun: 1 windows (created Sat May 30 02:20:06 2026)
ccv20260529r10_illumina_run_qc_dryrun: 1 windows (created Sat May 30 02:19:54 2026)
ccv20260529r10_inflection-bjuice-product-v0_1: 1 windows (created Sat May 30 01:04:03 2026)
ccv20260529r10_inflection-bjuice-product-v0_1_dryrun: 1 windows (created Sat May 30 01:01:13 2026)
ccv20260529r10_ont_run_qc: 1 windows (created Sat May 30 02:48:21 2026)
ccv20260529r10_ont_run_qc_dryrun: 1 windows (created Sat May 30 02:45:36 2026)
ccv20260529r11_illumina_bclconvert: 1 windows (created Sat May 30 03:11:46 2026)
ccv20260529r11_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 03:09:02 2026)
ccv20260529r11_illumina_run_qc: 1 windows (created Sat May 30 03:11:46 2026)
ccv20260529r11_illumina_run_qc_bclconvert: 1 windows (created Sat May 30 03:11:49 2026)
ccv20260529r11_illumina_run_qc_bclconvert_dryrun: 1 windows (created Sat May 30 03:09:02 2026)
ccv20260529r11_illumina_run_qc_dryrun: 1 windows (created Sat May 30 03:09:02 2026)
ccv20260529r11_ont_run_qc: 1 windows (created Sat May 30 03:17:15 2026)
ccv20260529r11_ont_run_qc_dryrun: 1 windows (created Sat May 30 03:14:31 2026)
ccv20260529r11_ultima_run_qc: 1 windows (created Sat May 30 03:27:18 2026)
ccv20260529r11_ultima_run_qc_dryrun: 1 windows (created Sat May 30 03:24:33 2026)
ccv20260529r12_ultima_run_qc: 1 windows (created Sat May 30 03:34:57 2026)
ccv20260529r12_ultima_run_qc_dryrun: 1 windows (created Sat May 30 03:32:12 2026)
ccv20260529r13_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 03:41:49 2026)
ccv20260529r13_illumina_run_qc_bclconvert_dryrun: 1 windows (created Sat May 30 03:41:49 2026)
ccv20260529r13_ultima_run_qc: 1 windows (created Sat May 30 03:44:33 2026)
ccv20260529r13_ultima_run_qc_dryrun: 1 windows (created Sat May 30 03:41:49 2026)
ccv20260529r14_illumina_bclconvert: 1 windows (created Sat May 30 03:53:39 2026)
ccv20260529r14_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 03:50:54 2026)
ccv20260529r14_illumina_run_qc_bclconvert: 1 windows (created Sat May 30 03:53:39 2026)
ccv20260529r14_illumina_run_qc_bclconvert_dryrun: 1 windows (created Sat May 30 03:50:54 2026)
ccv20260529r14_ultima_run_qc: 1 windows (created Sat May 30 03:53:39 2026)
ccv20260529r14_ultima_run_qc_dryrun: 1 windows (created Sat May 30 03:50:54 2026)
ccv20260529r15_illumina_bclconvert: 1 windows (created Sat May 30 04:09:12 2026)
ccv20260529r15_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 04:06:28 2026)
ccv20260529r15_illumina_run_qc_bclconvert: 1 windows (created Sat May 30 04:09:12 2026)
ccv20260529r15_illumina_run_qc_bclconvert_dryrun: 1 windows (created Sat May 30 04:06:28 2026)
ccv20260529r17_ont_run_qc: 1 windows (created Sat May 30 04:55:04 2026)
ccv20260529r17_ont_run_qc_dryrun: 1 windows (created Sat May 30 04:52:20 2026)
ccv20260529r18_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 05:04:08 2026)
ccv20260529r19_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 05:09:59 2026)
ccv20260529r20_simple-test: 1 windows (created Sat May 30 05:24:01 2026)
ccv20260529r20_simple-test_dryrun: 1 windows (created Sat May 30 05:21:17 2026)
ccv20260529r21_ont_run_qc: 1 windows (created Sat May 30 05:44:02 2026)
ccv20260529r21_ont_run_qc_dryrun: 1 windows (created Sat May 30 05:41:17 2026)
ccv20260529r22_illumina_bclconvert: 1 windows (created Sat May 30 05:58:27 2026)
ccv20260529r22_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 05:55:44 2026)
ccv20260529r22_ont_run_qc: 1 windows (created Sat May 30 05:58:28 2026)
ccv20260529r22_ont_run_qc_dryrun: 1 windows (created Sat May 30 05:55:44 2026)
ccv20260529r23_ont_run_qc_dryrun: 1 windows (created Sat May 30 06:01:27 2026)
ccv20260529r24_illumina_bclconvert: 1 windows (created Sat May 30 06:08:07 2026)
ccv20260529r24_illumina_bclconvert_dryrun: 1 windows (created Sat May 30 06:05:23 2026)
ccv20260529r2_simple-test_dryrun: 1 windows (created Fri May 29 20:02:54 2026)
ccv20260529r4_simple-test_dryrun: 1 windows (created Fri May 29 20:10:17 2026)
ccv20260529r5_illumina_hg002_kitchensink_multiqc_dryrun: 1 windows (created Fri May 29 20:33:03 2026)
ccv20260529r5_illumina_snv_alignstats_relatedness_vep_multiqc: 1 windows (created Fri May 29 20:38:08 2026)
ccv20260529r5_illumina_snv_alignstats_relatedness_vep_multiqc_dryrun: 1 windows (created Fri May 29 20:28:19 2026)
ccv20260529r5_simple-test_dryrun: 1 windows (created Fri May 29 20:21:14 2026)
ccv20260529r5_ultima_snv_alignstats_dryrun: 1 windows (created Fri May 29 20:35:30 2026)
ccv20260529r6_ont_snv_alignstats: 1 windows (created Fri May 29 21:22:52 2026)
ccv20260529r6_ont_snv_alignstats_dryrun: 1 windows (created Fri May 29 21:14:13 2026)
ccv20260529r6_ont_snv_alignstats_kitchensink: 1 windows (created Fri May 29 21:38:03 2026)
ccv20260529r6_ont_snv_alignstats_kitchensink_dryrun: 1 windows (created Fri May 29 21:26:24 2026)
ccv20260529r6_pacbio_snv_alignstats: 1 windows (created Fri May 29 21:55:20 2026)
ccv20260529r6_pacbio_snv_alignstats_dryrun: 1 windows (created Fri May 29 21:48:53 2026)
ccv20260529r6_ultima_snv_alignstats: 1 windows (created Fri May 29 21:00:58 2026)
ccv20260529r6_ultima_snv_alignstats_dryrun: 1 windows (created Fri May 29 20:54:44 2026)
ccv20260529r6_ultima_snv_alignstats_kitchensink_dryrun: 1 windows (created Fri May 29 21:03:59 2026)
ccv20260529r7_hybrid_ilmn_ont_snv: 1 windows (created Fri May 29 23:40:38 2026)
ccv20260529r7_hybrid_ilmn_ont_snv_dryrun: 1 windows (created Fri May 29 23:37:43 2026)
ccv20260529r7_hybrid_ilmn_ont_snv_kitchensink: 1 windows (created Fri May 29 23:40:38 2026)
ccv20260529r7_hybrid_ilmn_ont_snv_kitchensink_dryrun: 1 windows (created Fri May 29 23:37:43 2026)
ccv20260529r7_illumina_snv_alignstats: 1 windows (created Fri May 29 23:38:25 2026)
ccv20260529r7_illumina_snv_alignstats_dryrun: 1 windows (created Fri May 29 23:35:31 2026)
ccv20260529r7_inflection-bjuice-product-v0_1_dryrun: 1 windows (created Sat May 30 00:04:05 2026)
ccv20260529r7_roche_snv_alignstats_dryrun: 1 windows (created Fri May 29 23:32:36 2026)
ccv20260529r7_simple-test: 1 windows (created Fri May 29 23:48:58 2026)
ccv20260529r7_simple-test_dryrun: 1 windows (created Fri May 29 23:46:10 2026)
ccv20260529r7_ultima_snv_alignstats_kitchensink: 1 windows (created Fri May 29 23:33:28 2026)
ccv20260529r7_ultima_snv_alignstats_kitchensink_dryrun: 1 windows (created Fri May 29 23:30:34 2026)
ccv20260529r8_inflection-bjuice-product-v0_1_dryrun: 1 windows (created Sat May 30 00:23:19 2026)
ccv20260529r9_hybrid_ultima_ont_snv: 1 windows (created Sat May 30 00:35:27 2026)
ccv20260529r9_hybrid_ultima_ont_snv_dryrun: 1 windows (created Sat May 30 00:31:46 2026)
ccv20260529r9_inflection-bjuice-product-v0_1_dryrun: 1 windows (created Sat May 30 00:28:38 2026)

workflow_processes:
    965       1 Ss    1-03:31:14 /usr/bin/python3 /usr/bin/networkd-dispatcher --run-startup-triggers
   1032       1 Ssl   1-03:31:13 /usr/bin/python3 /usr/share/unattended-upgrades/unattended-upgrade-shutdown --wait-for-signal
   6584       1 Ss    1-03:23:08 /usr/bin/python3 /usr/bin/glances -s -B 127.0.0.1
   9412       1 Ss    1-03:22:32 /opt/parallelcluster/pyenv/versions/3.12.8/envs/cookbook_virtualenv/bin/python3.12 /opt/parallelcluster/pyenv/versions/3.12.8/envs/cookbook_virtualenv/bin/supervisord -n -c /etc/supervisord.conf
   9417    9412 S     1-03:22:30  \_ /opt/parallelcluster/pyenv/versions/3.12.8/envs/node_virtualenv/bin/python3.12 /opt/parallelcluster/pyenv/versions/3.12.8/envs/node_virtualenv/bin/clustermgtd
   9418    9412 S     1-03:22:30  \_ /opt/parallelcluster/pyenv/versions/3.12.8/envs/cookbook_virtualenv/bin/python /opt/parallelcluster/scripts/clusterstatusmgtd.py
  81703       1 Ss      10:23:15 tmux new-session -d -s ccv20260529_simple-test_dryrun -e DAYLILY_RUN_DIR=/home/ubuntu/daylily-runs/ccv20260529_simple-test_dryrun -e DAYLILY_REPO_PATH=/fsx/analysis_results/ubuntu/ccv20260529_simple-test_dryrun/daylily-omics-analysis -e DAYLILY_TMUX_LOG=/home/ubuntu/daylily-runs/ccv20260529_simple-test_dryrun/tmux.log bash -lc 'source /home/ubuntu/daylily-runs/ccv20260529_simple-test_dryrun/launch.sh >>/home/ubuntu/daylily-runs/ccv20260529_simple-test_dryrun/tmux.log 2>&1'
 791889   81703 Ss+        18:50  \_ bash -lc source /home/ubuntu/daylily-runs/ccv20260529r22_ont_run_qc/launch.sh >>/home/ubuntu/daylily-runs/ccv20260529r22_ont_run_qc/tmux.log 2>&1
 796545  791889 S+         16:12  |   \_ /home/ubuntu/miniconda3/envs/DAY-EC/bin/python /home/ubuntu/miniconda3/envs/DAY-EC/bin/dyec export --region us-west-2 --cluster dyec-test --source-path /fsx/analysis_results/ubuntu/ccv20260529r22_ont_run_qc --destination-s3-uri s3://lsmc-ssf-sequencing-data/derived/validation/dyec-test/ubuntu/ccv20260529r22_ont_run_qc/ --output-dir /home/ubuntu/daylily-runs/ccv20260529r22_ont_run_qc/export

slurm_queue:
             JOBID PARTITION         NAME     USER ST       TIME  NODES NODELIST(REASON)
