.mypy_cache/
/.coverage
/.coverage.*
/.nox/
/.python-version
/.pytype/
/.gitmodules/
/dist/
/tmp/
/data/src/
/src/scanmst/blat/linux/
/src/scanmst/blat/darwin/
/data/
/dependency/
/build/
/dependency/
/docs/_build/
/src/*.egg-info/
blat/linux/
blat/darwin/
__pycache__/
poetry.lock
# NOTE: no `*.lock` catch-all -- uv.lock is committed on purpose.
.venv/
venv/

# editor
profile/
.idea/
.run/

#cmake
/cmake-build*/
# jupyter notebook
*.ipynb
# bam
*.sam
# debug reprot
/debuglog/
.DS*

# profile file
*.pstat


# c++
*.o
*.so
main.cpp
neovide*
compile_commands.json
.cache
issues
site/

.omc/
.claude/
.serena/
CLAUDE.md
