## biolearn
.pypirc
.coverage
coverage.xml
.dmypy.json
.gradle
.hypothesis
.mypy_cache
.additional_ci_files
/.extracted_scripts/
*/*.pyc
*/*.so*
*/**/__pycache__
*/**/*.dylib*
*/**/*.pyc
*/**/*.pyd
*/**/*.so*
*/**/**/*.pyc
*/**/**/**/*.pyc
*/**/**/**/**/*.pyc

*/_build
*/_static
*/_templates
*/build
*/dist

@eaDir

legacy

test-reports/
test/*.bak
test/**/*.bak
test/.coverage
test/.hypothesis/

# Root level file used in CI to specify certain env configs.
# E.g., see .circleci/config.yaml
env


# IPython notebook checkpoints
.ipynb_checkpoints

# Editor temporaries
*.swa
*.swb
*.swc
*.swd
*.swe
*.swf
*.swg
*.swh
*.swi
*.swj
*.swk
*.swl
*.swm
*.swn
*.swo
*.swp
*~
.~lock.*

# macOS dir files
.DS_Store

# Ninja files
.ninja_deps
.ninja_log
compile_commands.json
*.egg-info/
pytorch_bio_transformations/docs/source/scripts/activation_images/
pytorch_bio_transformations/docs/source/scripts/quantization_backend_configs/

## General

# Compiled Object files
*.slo
*.lo
*.o
*.cuo
*.obj

# Compiled Dynamic libraries
*.so
*.dylib
*.dll

# Compiled Static libraries
*.lai
*.la
*.a
*.lib

# Compiled protocol buffers
*.pb.h
*.pb.cc
*_pb2.py

# Compiled python
*.pyc
*.pyd

# Compiled MATLAB
*.mex*

# IPython notebook checkpoints
.ipynb_checkpoints

# Editor temporaries
*.swn
*.swo
*.swp
*~

# NFS handle files
**/.nfs*

# Sublime Text settings
*.sublime-workspace
*.sublime-project

# Eclipse Project settings
*.*project
.settings

# QtCreator files
*.user

# PyCharm files
.idea

# GDB history
.gdb_history

## Caffe2

# build, distribute, and bins (+ python proto bindings)
build/
# Allow tools/build/ for build support.
!tools/build/
build_host_protoc
build_android
build_ios
.build_debug/*
.build_release/*
.build_profile/*
distribute/*
*.testbin
*.bin
cmake_build
.cmake_build
gen
.setuptools-cmake-build
.pytest_cache
aten/build/*

# Bram
plsdontbreak

# Generated documentation
pytorch_bio_transformations/docs/_site
pytorch_bio_transformations/docs/gathered
_site
doxygen
pytorch_bio_transformations/docs/dev

# LevelDB files
*.sst
*.ldb
LOCK
CURRENT
MANIFEST-*

# generated version file
caffe2/version.py

# setup.py intermediates
.eggs
caffe2.egg-info
MANIFEST

# Atom/Watchman required file
.watchmanconfig
.watchman

# Files generated by CLion
cmake-build-debug

# BEGIN NOT-CLEAN-FILES (setup.py handles this marker. Do not change.)
#
# Below files are not deleted by "setup.py clean".

# Downloaded bazel
tools/bazel

# Visual Studio Code files
.vs
/.vscode/*
!/.vscode/extensions.json
!/.vscode/settings_recommended.json

# YouCompleteMe config file
.ycm_extra_conf.py

# Files generated when a patch is rejected
*.orig
*.rej

# Files generated by ctags
CTAGS
GTAGS
GRTAGS
GSYMS
GPATH
tags
TAGS


# ccls file
.ccls-cache/

# clang tooling storage location
.clang-format-bin
.clang-tidy-bin
.lintbin

# clangd background index
.clangd/
.cache/

# bazel symlinks
bazel-*

# xla repo
xla/

# direnv, posh-direnv
.env
.envrc
.psenvrc

# generated shellcheck directories
.shellcheck_generated*/

# zip archives
*.zip

# core dump files
**/core.[1-9]*

# Generated if you use the pre-commit script for clang-tidy
pr.diff

# coverage files
*/**/.coverage.*

# buck generated files
.buckd/
.lsp-buck-out/
.lsp.buckd/
buck-out/

# Downloaded libraries
third_party/ruy/
third_party/glog/

# Virtualenv
venv/

# Log files
*.log
sweep/

# Pyre configs (for internal usage)
.pyre_configuration
.pyre_configuration.codenav
.arcconfig
.stable_pyre_client
.pyre_client
/legacy/
/data/
/dist/
/compiled_docs/
