Skip to content

msmu

TMT

Initializing search

msmu

INSTALLATION
TUTORIALS
TUTORIALS
- Quick Start
- TMT
- LFQ
- DIA
- Visualization
API
API
- msmu
- _version
- logging_utils
- msmu
- plotting
  plotting
  - _plotting
  - __pdata
  - __ptypes
  - __trace
  - _template
  - _utils
  - plots
- preprocessing
  preprocessing
  - _preprocessing
  - _compute_precursor_purity
  - _filter
  - _infer_protein
  - _infer_protein_deprecated
  - normalise
    normalise
    
    _normalise
    
    _normalise
    
    normalisation_methods
  - summarise
    summarise
    
    _summarise
    
    _summarise
    
    _summarise_deprecated
    
    _summariser
    
    _summariser_deprecated
- read write
  read write
- stats
  stats
  - _stats
  - target_decoy_q
- tools
  tools
  - _tools
  - _pca
  - _precursor_purity
  - _umap
  - dea
    dea
    
    _dea
    
    PermutationTest
    
    StatTest
    
    _dea
- utils
  utils
  - _utils
  - fasta
  - peptide
  - protein
  - subset
  - utils

TMT

November 20, 2025

Made with Material for MkDocs