Welcome to Biovis Media Extension’s documentation!¶
Summary¶
Biovis-media-extension is an extension for Python-Markdown. It can launch dynamic plot or preprocess multimedia.
Dependencies¶
Biovis requires Python 3+ and Python-Markdown to be loaded in your environment in order for full functionality to work.
Syntax¶
# Such as @plugin-name(arg1=value, arg2=value)
@boxplot-r(dataFile='boxplot-r.rds', dataType='rds', title='',
xAxis='DoubleBlind_0to24', xTitle='DoubleBlind_0to24',
xAngle=90, yAxis='HbA1c_DF24to0', yTitle='HbA1c_DF24to0',
colorAttr='DoubleBlind_0to24', subtitle='', text='')
Installation¶
pip install biovis-media-extension
Plugins¶
boxplot-r: Interactive boxplot visualization from a Shiny app(r version).
corrplot-r: Interactive correlation plot visualization from a Shiny app(r version).
data-table-js: Another interactive data table. It is based on datatables js library.
density-plot: Interactive density plot visualization from a Shiny app(r version).
group-boxplot: Interactive group-boxplot visualization from a Shiny app(r version).
pivot-table-js: Interactive pivot-table and pivot-chart. It is based on webdatarocks and highcharts.
rocket-plot-r: Interactive rocket plot visualization from a Shiny app(r version).
stack-barplot-r: Interactive stack barplot visualization from a Shiny app(r version).
upset-r: Interactive upset plot visualization from a Shiny app(r version).
violin-plot-r: Interactive violin plot visualization from a Shiny app(r version).