LICENSE.md
README.md
pyproject.toml
modules/__init__.py
modules/bruker_concat_tif.py
modules/cell_registration.py
modules/compute_zcorr.py
modules/extraction.py
modules/motion_correction.py
modules/registration_backends/run_roicat.py
modules/registration_backends/run_track2p.py
modules/utils/plot_zones.py
modules/utils/save_z_motion_args.py
optimouse.egg-info/PKG-INFO
optimouse.egg-info/SOURCES.txt
optimouse.egg-info/dependency_links.txt
optimouse.egg-info/requires.txt
optimouse.egg-info/top_level.txt
pipeline/__init__.py
pipeline/pipeline_cnmf.py
pipeline/pipeline_mcorr.py
pipeline/register_sessions.py
pipeline/roi_zcorr.py
pipeline/configs/config_template_cnmf.json
pipeline/configs/config_template_suite2p.json
pipeline/utils/__init__.py
pipeline/utils/config_loader.py
pipeline/utils/pipeline_utils.py
tests/test_motion_correction.py
tests/test_utils.py