{% extends 'base.html' %} {% block scripts %} {{ super() }} {% if debug %} {% else %} {% endif %} {% endblock %} {% block onload %} {{ super() }} dgenies.run.init('{{ s_id }}', {{ allowed_ext }}, {{ max_upload_file_size }}, '{{ target }}', '{{ query }}', '{{ backup }}', '{{ batch }}', {{ tools_names }}, {{ tools_ava }}, {{ tools_checking }}, {{ max_batch_jobs }}); {% endblock %} {% block content %} {% set fnote = 1 %} {% if inforun is not none %}
{{ inforun.message | safe }}
{% endif %}

Launch map analysis

{% if mode == "webserver" %}
We will send you results by mail
{% endif %}
{# Tab 1 #} {% set fnote_tab = fnote %}
Can be gzipped. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gz or .fna.gz
Can be gzipped. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gz or .fna.gz
{% if tools | length > 1 %}
{% for tool in tools_names %} {% endfor %}
{% else %} {% endif %} {% if tools | length > 1 %} {% for tool in tools_names %} {% set tool_loop = loop %} {% if tools[tool].options|length%}
{% for opt in tools_options[tool] %}
{{ opt.label }} 
{% for entry in opt['entries'] %}
{% endfor %}
{{ opt.hint }}
{% endfor %}
{% endif %} {% endfor %} {% else %} {% set tool = tools_names[0] %} {% if tools[tool].options %}
{% for opt in tools[tool].options %}
{% for entry in opt['entries'] %}
{% endfor %}
{% endfor %}
{% endif %} {% endif %}

This instance configuration

  • Uploaded file size is {% if limits.upload_size!='-1.0 B' %}limited to {{ limits.upload_size }}{% else %}not limited{% endif %}.
  • {% if limits.uncompressed_size_ava!='-1.0 B' or limits.uncompressed_size!='-1.0 B' %}
  • When uncompressed, the size of each file is limited to:
    • {% if limits.uncompressed_size_ava!='-1.0 B' %}{{ limits.uncompressed_size_ava }}{% else %}unlimited{% endif %} in all vs all mode.
    • {% if limits.uncompressed_size!='-1.0 B' %}{{ limits.uncompressed_size }}{% else %}unlimited{% endif %} else.
  • {% endif %} {% if mode == "webserver" %}
  • Computation wall times are set to (hh:mm:ss):
    • {{ limits.walltime_prepare }} for preparation step,
    • {{ limits.walltime_align }} for align step.
    • {% endif %}
{# Tab 2 #} {% set fnote_tab = fnote %}
In PAF or MAF format. Must end with .paf or .maf
Fasta file or index built by our tool. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gz, .fna.gz or .idx.
Fasta file or index built by our tool. Must end with .fa, .fasta, .fna, .fa.gz, .fasta.gz, .fna.gz or .idx.

- or -

TAR file from a previous run or built following this documentation. Must ends with .tar or .tar.gz

This instance configuration

  • Uploaded file size is {% if limits.upload_size!='-1.0 B' %}limited to {{ limits.upload_size }}{% else %}not limited{% endif %}.
  • {% if limits.uncompressed_size!='-1.0 B' %}
  • When uncompressed, the size of each file must be under {{ limits.uncompressed_size }}
  • {% endif %} {% if mode == "webserver" %}
  • Computation wall time for indexing is set to {{ limits.walltime_prepare }} (hh:mm:ss).
  • {% endif %}
{# Tab 3 #} {% set fnote_tab = fnote %}
Text file following batch format. Must end with .txt
File Size State Actions
{% if example_align %} {% endif %} {% if example_backup %} {% endif %} {% if example_batch %} {% endif %}
{% set fnote = 1 %}
{% set fnote_tab = fnote %}

{{ fnote_tab }} Look at the batch format page for full description. Default options are displayed in bold

{% set fnote_tab = fnote_tab + 1 %}
{% endblock %}