MANIFEST.in
README.md
pyproject.toml
examples/demo_gwas.py
pygapit/__init__.py
pygapit/cli.py
pygapit/gapit.py
pygapit/py.typed
pygapit.egg-info/PKG-INFO
pygapit.egg-info/SOURCES.txt
pygapit.egg-info/dependency_links.txt
pygapit.egg-info/entry_points.txt
pygapit.egg-info/requires.txt
pygapit.egg-info/top_level.txt
pygapit/gs/__init__.py
pygapit/gs/blup.py
pygapit/gwas/__init__.py
pygapit/gwas/blink.py
pygapit/gwas/farmcpu.py
pygapit/gwas/glm.py
pygapit/gwas/mlm.py
pygapit/gwas/mlmm.py
pygapit/io/__init__.py
pygapit/io/formats.py
pygapit/stats/__init__.py
pygapit/stats/emma.py
pygapit/stats/kinship.py
pygapit/stats/pca.py
pygapit/stats/testing.py
pygapit/visualization/__init__.py
pygapit/visualization/plots.py
tests/__init__.py
tests/conftest.py
tests/test_pygapit.py