Batch Effect QC Report
Data Information
Basic Describe
· Number of samples in each Batch and Condition
· Variation Analysis (F Test) of Each Data
· K-S Test of Each Pair Batch
· Domain Variance Score
· Measures of confounding between Batch and Condition
· Distribution Visualization
Metric Score
Raw
· K Nearest Neighbor Batch Effects Test
· Local Inverse Simpson's Index
· K Nearest Neighbor Similarity
Visualization
· Sample
· Q-Q Cross Fit
· Q-Q Fit Norm & Histogram
Summary