LICENSE
README.md
pyproject.toml
setup.py
elf/__init__.py
elf/__version__.py
elf/util.py
elf/color/__init__.py
elf/color/palette.py
elf/evaluation/__init__.py
elf/evaluation/cremi_score.py
elf/evaluation/dice.py
elf/evaluation/matching.py
elf/evaluation/rand_index.py
elf/evaluation/util.py
elf/evaluation/variation_of_information.py
elf/htm/__init__.py
elf/htm/parser.py
elf/htm/visualization.py
elf/ilastik/__init__.py
elf/ilastik/carving.py
elf/io/__init__.py
elf/io/extensions.py
elf/io/files.py
elf/io/image_stack_wrapper.py
elf/io/intern_wrapper.py
elf/io/knossos_wrapper.py
elf/io/label_multiset_wrapper.py
elf/io/mrc_wrapper.py
elf/io/msr_wrapper.py
elf/io/nifti_wrapper.py
elf/io/zarr_wrapper.py
elf/label_multiset/__init__.py
elf/label_multiset/create.py
elf/label_multiset/label_multiset.py
elf/label_multiset/serialize.py
elf/mesh/__init__.py
elf/mesh/io.py
elf/mesh/mesh.py
elf/mesh/mesh_to_segmentation.py
elf/parallel/__init__.py
elf/parallel/common.py
elf/parallel/copy_dataset.py
elf/parallel/distance_transform.py
elf/parallel/filters.py
elf/parallel/io.py
elf/parallel/label.py
elf/parallel/local_maxima.py
elf/parallel/operations.py
elf/parallel/relabel.py
elf/parallel/seeded_watershed.py
elf/parallel/size_filter.py
elf/parallel/stats.py
elf/parallel/unique.py
elf/segmentation/__init__.py
elf/segmentation/blockwise_lmc_impl.py
elf/segmentation/blockwise_mc_impl.py
elf/segmentation/blockwise_mws_impl.py
elf/segmentation/clustering.py
elf/segmentation/embeddings.py
elf/segmentation/features.py
elf/segmentation/gasp.py
elf/segmentation/gasp_utils.py
elf/segmentation/learning.py
elf/segmentation/lifted_multicut.py
elf/segmentation/multicut.py
elf/segmentation/mutex_watershed.py
elf/segmentation/postprocess.py
elf/segmentation/stitching.py
elf/segmentation/utils.py
elf/segmentation/watershed.py
elf/segmentation/workflows.py
elf/skeleton/__init__.py
elf/skeleton/skeletonize.py
elf/skeleton/thinning.py
elf/skeleton/io/__init__.py
elf/skeleton/io/n5.py
elf/skeleton/io/nml.py
elf/skeleton/io/swc.py
elf/tracking/__init__.py
elf/tracking/mamut.py
elf/tracking/motile_tracking.py
elf/tracking/tracking_utils.py
elf/transformation/__init__.py
elf/transformation/affine.py
elf/transformation/converter.py
elf/transformation/elastix_parser.py
elf/transformation/elastix_wrapper.py
elf/transformation/ngff.py
elf/transformation/resize.py
elf/transformation/transform_impl.py
elf/transformation/transformix_wrapper.py
elf/visualisation/__init__.py
elf/visualisation/edge_visualisation.py
elf/visualisation/grid_views.py
elf/visualisation/metric_visualization.py
elf/visualisation/object_visualisation.py
elf/visualisation/size_histogram.py
elf/visualisation/view_container.py
elf/wrapper/__init__.py
elf/wrapper/affine_volume.py
elf/wrapper/base.py
elf/wrapper/cached_volume.py
elf/wrapper/generic.py
elf/wrapper/resized_volume.py
python_elf.egg-info/PKG-INFO
python_elf.egg-info/SOURCES.txt
python_elf.egg-info/dependency_links.txt
python_elf.egg-info/entry_points.txt
python_elf.egg-info/requires.txt
python_elf.egg-info/top_level.txt
test/test_util.py
test/color/__init__.py
test/color/test_color.py
test/evaluation/__init__.py
test/evaluation/test_dice.py
test/evaluation/test_evaluation.py
test/evaluation/test_matching.py
test/htm/__init__.py
test/htm/test_parser.py
test/htm/test_visualization.py
test/ilastik/__init__.py
test/ilastik/test_carving.py
test/io_tests/__init__.py
test/io_tests/test_files.py
test/io_tests/test_image_stack_wrapper.py
test/io_tests/test_intern_wrapper.py
test/io_tests/test_knossos_wrapper.py
test/io_tests/test_mrc_wrapper.py
test/io_tests/test_msr_wrapper.py
test/io_tests/test_nifti_wrapper.py
test/io_tests/test_zarr_wrapper.py
test/label_multiset/__init__.py
test/label_multiset/generate_test_data.py
test/label_multiset/test_label_multiset.py
test/label_multiset/test_label_multiset_paintera.py
test/mesh/__init__.py
test/mesh/test_io.py
test/mesh/test_mesh.py
test/mesh/test_mesh_to_segmentation.py
test/parallel/__init__.py
test/parallel/test_copy_dataset.py
test/parallel/test_distance_transform.py
test/parallel/test_filters.py
test/parallel/test_label.py
test/parallel/test_local_maxima.py
test/parallel/test_operations.py
test/parallel/test_parallel.py
test/parallel/test_seeded_watershed.py
test/parallel/test_size_filter.py
test/parallel/test_stats.py
test/segmentation/__init__.py
test/segmentation/test_GASP.py
test/segmentation/test_clustering.py
test/segmentation/test_embeddings.py
test/segmentation/test_features.py
test/segmentation/test_learning.py
test/segmentation/test_lifted_multicut.py
test/segmentation/test_multicut.py
test/segmentation/test_mutex_watershed.py
test/segmentation/test_postprocess.py
test/segmentation/test_stitching.py
test/segmentation/test_utils.py
test/segmentation/test_watershed.py
test/segmentation/test_workflows.py
test/skeleton/__init__.py
test/skeleton/test_io.py
test/skeleton/test_skeletonize.py
test/tracking/__init__.py
test/tracking/test_mamut.py
test/tracking/test_motile_tracking.py
test/tracking/test_tracking_utils.py
test/transformation/__init__.py
test/transformation/test_affine.py
test/transformation/test_converter.py
test/transformation/test_elastix_parser.py
test/transformation/test_ngff.py
test/transformation/test_resize.py
test/transformation/test_transformation.py
test/wrapper/__init__.py
test/wrapper/test_affine_volume.py
test/wrapper/test_base.py
test/wrapper/test_cached_volume.py
test/wrapper/test_generic.py
test/wrapper/test_resized_volume.py