snippy_ng/__about__.py,sha256=rKH5HcGXKoHKllj4VoVBRlI68xc3Q7ScJDKsPX7iJwQ,381
snippy_ng/__init__.py,sha256=NvzzA8IVN6sJMmPhWuJn5AVF5zivSdd_9IYGfeDHoIU,108
snippy_ng/__main__.py,sha256=z_k0WCvooG3YVIU4OBws31YmlSUs_KJKmJ7Ap9MBzJ8,215
snippy_ng/context.py,sha256=oWB6KUwJMD0qrt8IMxrHbaWB4nITexUkMjCy3IXXXWI,1543
snippy_ng/dependencies.py,sha256=rkUMnpFrIAnOXFVhAmusjzmQHvYkyJzi4t4Ulwr21j4,9597
snippy_ng/exceptions.py,sha256=ldQVQHzjkPZm7sVZh6g8IwN5Ln4-73wSaey3X_sVsDY,672
snippy_ng/logging.py,sha256=rrslN8N2UtxoXo9u9TnC3vzIvkQqRSTRZ1t9wIcSsDE,2034
snippy_ng/metadata.py,sha256=X2NUfCYpgsAgrIQqVIBrOAESmn8c4xc9f78RyHkT0A8,4203
snippy_ng/cli/__init__.py,sha256=oGe59D5FsoZDeC60U1R-TT7QFEb1LWKKAnViuVTYlQI,2434
snippy_ng/cli/asm_cli.py,sha256=uQxnsZcP0Pua166aZecb6VtXazAGPhIIoj4QLU7mATM,1690
snippy_ng/cli/core_cli.py,sha256=dit2KEFM4y4mCcwMKN6m52Hytm67YSZTtrjOtCw7tFE,2008
snippy_ng/cli/gather_cli.py,sha256=tJYCi0vCi0qUI0gTIMqVGZoU0Z1BxgdT3Qv0UJbwPKc,2244
snippy_ng/cli/long_cli.py,sha256=N82y86ODLurZYENSWG0xCseh4Easknt1hvU-EcvO53A,4407
snippy_ng/cli/multi_cli.py,sha256=lO9A89LdsKDlRj2Z5ty1x6VHFVqc0-FwmN-rvgCsAq0,2593
snippy_ng/cli/ref_cli.py,sha256=GGsLtqzCpPOv06benxvZAfAqdpmwJe6umxe_ovpeOOg,1527
snippy_ng/cli/report_cli.py,sha256=4A1N5gtYMcYvVp260zxFCRNFAvMdiwNkEQ9o8O4cAPg,3657
snippy_ng/cli/samclip_cli.py,sha256=Cn_nY5YcYSzZeU6VzzVicN11dubjQd5ZvlXJyj7zZRQ,1811
snippy_ng/cli/short_cli.py,sha256=Sw89iPxc1eYJfVrs9G6Z7ysAKX__jXzV--VD7wVp0sg,3424
snippy_ng/cli/tree_cli.py,sha256=eAJzFKY0_OTq6NigoQycX58H7jWMA5PTl2tu2dDcaK8,2800
snippy_ng/cli/yolo_cli.py,sha256=7BS39muv6P-4a2nvLpxtpvBTqC1MiHNMSYXbKaPfTVI,5643
snippy_ng/cli/utils/__init__.py,sha256=lWpo-efraOuPfyLYAccDAlvtL9SQQrTSP9yt4Yh3SBg,1110
snippy_ng/cli/utils/bug_catcher.py,sha256=MMqtLl9GlkAz4dum1uLWZyCcvxR1Wy93fdzVim2dru4,4277
snippy_ng/cli/utils/globals.py,sha256=66A41x31gxhtA0xqji3gjCx9qrm9Lo_bofgNZ40WGSk,6909
snippy_ng/pipelines/__init__.py,sha256=_HLqHAd9m3FLDA42TvEbmCMeRzuOvkCY2lHfP9GORI8,13505
snippy_ng/pipelines/asm.py,sha256=PPobrq_av_v4_BHjsMOAbxVwUCAk3TRhEVgyhl_PrLw,5512
snippy_ng/pipelines/common.py,sha256=MDAlDOTzXbAZ0iwqdKzKFBvi9-bH3dDlWsPM3DvMWA4,6216
snippy_ng/pipelines/core.py,sha256=9fImTBN6rUCNyYg3xkZjW1I_0GYqdRK1a9Jvkaxvw2U,1996
snippy_ng/pipelines/long.py,sha256=JkbwnOUCJgEJnJLiYXKdduXRjdRBJBY9xNAlv1r7uTw,11039
snippy_ng/pipelines/multi.py,sha256=V6_94hGVndRhR0rifZ90fGDTxbbIOA7GncZqZ1-MsEE,8882
snippy_ng/pipelines/report.py,sha256=GUuKNBJLY_wJ1ns9DdzD_w8gwijVXm0M5Sv7G_Qt6Rg,1745
snippy_ng/pipelines/short.py,sha256=hcUFKuYJ-XfvXvNdxf58t0PrUKJ1etXTs4w7xh41Dtw,9787
snippy_ng/pipelines/tree.py,sha256=HygDHbIqkERIJDpqwjLD22igyQFqFRxnptnASl82i9k,1295
snippy_ng/stages/__init__.py,sha256=Ls7hRdwxSnWavCO7XUbypbHd81fOvS5atv2CjxFCq38,19270
snippy_ng/stages/alignment.py,sha256=IG-ePPF9xpCLtfWoxcFESIWNfvRp0GQnC7SQAQasCrs,10257
snippy_ng/stages/calling.py,sha256=vfNX0vo0sfBQrjeRn1BWmve5oiSpcnBT7ZoR7XOUin8,14174
snippy_ng/stages/clean_reads.py,sha256=3mkw39k5tvc4zHMKG7I01n3ixnmc6nnLrtThnumFLEQ,7455
snippy_ng/stages/compression.py,sha256=0ND9ByroW6QsszhezBiq9Xy32SOmOI2gdU6EHB8AMrg,2752
snippy_ng/stages/consensus.py,sha256=TAkFVBIupk6iG7RWmND7Xpp76NWFXzgMPDTulTtvWaU,3400
snippy_ng/stages/consequences.py,sha256=ZSHyo3N_tz47JxeuX8k41f9wkT0Yez23vQZ1YzEQeKE,2033
snippy_ng/stages/copy.py,sha256=QnFkBOnNd4m71j5t6vEfxwocMGv51hiHOdG0difWgHo,2261
snippy_ng/stages/core.py,sha256=A4UKhIV7G2US9gK-HzM1es9stjnK00Ueb1h4rRXLY10,6806
snippy_ng/stages/downsample_reads.py,sha256=P6dv1TMZv2ibc98PvphwkynLtBkNoPoVo1uOXoC5ijk,12229
snippy_ng/stages/filtering.py,sha256=k4A69-l5T2MNVleP1rkdItQjERzICunQCWea-V7enzw,5866
snippy_ng/stages/masks.py,sha256=hVqe4o3rvNNAMVSpSepMP17yb8HsBk9p80AyG004bt8,8583
snippy_ng/stages/reporting.py,sha256=OCadAC5kJaBFsfGTa2FVEBMq_9BPrMfMJwSKkxMjtb4,20595
snippy_ng/stages/setup.py,sha256=hUSw4LOvi3Rokyk_-c2PaSaxbGF6pSZ2hCS9PkciB5g,20067
snippy_ng/stages/stats.py,sha256=KaZ1AI19Ju8pitCqi452Os3BuBo5jXkR2fVBBZh_234,25371
snippy_ng/stages/trees.py,sha256=Ol6r9idvvkpovKfn8r6mlc8awVV0JIfkLIeeHIUeYBM,3413
snippy_ng/stages/vcf.py,sha256=gG9AVHw0pOyuBmiBZUQDNOq0Md6F4YiGVwBgTZLRcwY,22219
snippy_ng/templates/epi-report/README.md,sha256=LO6ky5eWoL_3SW4wcBb8IfXolkjD3vBcfOnaaeyu0cw,245
snippy_ng/templates/epi-report/iso3166-2-export.csv,sha256=COIBBx39q6MiqYI_9J2UMd8iRG51ieG15HB8gEp2_4M,2102683
snippy_ng/templates/epi-report/snippy-epi-report.html,sha256=jGVVysHEDusTKkCy14yQdvT0jAgFQlHwD_xQ8BGyMnk,112969
snippy_ng/utils/files.py,sha256=2lQW5dfOLtM5BaIZipRsQKy6Ys083fEpmZwQSvxNva0,706
snippy_ng/utils/gather.py,sha256=D-i1n0aLQTDw4H2YDXdhuIDoOjsGcnqAsV0UClwCVVM,15160
snippy_ng/utils/samclip.py,sha256=Et459uK_qx8W1gwOuz-0ipA9asJ5H7aAEy_q8dEHIMs,6392
snippy_ng/utils/seq.py,sha256=gbp0ShcWEtSmR1vRSQyLEiTKsCBU91ygtYt-nVllrO0,530
snippy_nextgen-1.25.1.dist-info/METADATA,sha256=9zQsaNzhxrL_ZH4NiuLoDyAE46hMi-FdZ14ALQ43L1Q,4342
snippy_nextgen-1.25.1.dist-info/WHEEL,sha256=QccIxa26bgl1E6uMy58deGWi-0aeIkkangHcxk2kWfw,87
snippy_nextgen-1.25.1.dist-info/entry_points.txt,sha256=bFNQRCHBXfig0SU5Ba8sipctq-mlwEQv611uMPH0r6I,54
snippy_nextgen-1.25.1.dist-info/licenses/LICENSE.txt,sha256=2EtbIEsC6oT0hDoWB8mP643X4l51wwQRdhofPSN0MLc,1101
snippy_nextgen-1.25.1.dist-info/RECORD,,
