torch>=2.0.0
torchvision>=0.15.0
numpy>=1.24
pandas
matplotlib>=3.7
plotly
kaleido
scikit-learn
joblib
tqdm
opencv-python
tifffile
h5py
scipy
scikit-image>=0.26.0
ipywidgets
anywidget
pillow
umap-learn==0.5.12
nibabel<6,>=5.2.0
dcor==0.7
ipykernel>=6.29
jupyterlab>=4.0
jupyterlab_widgets>=3.0
nbformat>=5.9

[dev]
codespell>=2.4
interrogate>=1.7.0
mypy>=1.19.1
pandas-stubs
pre-commit>=3.7
pytest>=8.0
ruff>=0.15.4
types-requests
types-setuptools

[full]
torchdr<0.6,>=0.1

[full:sys_platform != "win32"]
pykeops==2.3

[mcp]
mcp>=2.0
