from phosphodisco.classes import ProteomicsData, prepare_data
from phosphodisco.parsers import (
    read_protein, read_phospho, read_annotation, column_normalize
)
from phosphodisco.nominate_regulators import (
    collapse_possible_regulators,
    calculate_regulator_coefficients
)
from phosphodisco import (
    visualize, classes, constants, nominate_regulators, parsers, utils, annotation_association, datasets
)

__version__ = "v0.0.1"

__all__ = [
    'ProteomicsData',
    'read_protein',
    'read_phospho',
    'read_annotation',
    'column_normalize',
    'prepare_data',
    'collapse_possible_regulators',
    'calculate_regulator_coefficients'
]
