Metadata-Version: 2.4
Name: linkapy
Version: 1.0.0
Requires-Dist: anndata >=0.11.1
Requires-Dist: scanpy >=1.10.4
Requires-Dist: rich >=13.9.4
Requires-Dist: pyarrow >=18.1.0
Requires-Dist: muon >=0.1.7
Requires-Dist: tables >=3.10.1
Requires-Dist: polars >=1.17.1
Requires-Dist: ruff ; extra == 'dev'
Requires-Dist: pytest ; extra == 'dev'
Requires-Dist: sphinx ; extra == 'docs'
Requires-Dist: sphinx-rtd-theme ; extra == 'docs'
Requires-Dist: sphinx-autoapi ; extra == 'docs'
Requires-Dist: build ; extra == 'build'
Provides-Extra: dev
Provides-Extra: docs
Provides-Extra: build
Summary: A common framework to analyse scNMT-seq data.
Author-email: Ward Deboutte <w@rddeboutte.com>
Requires-Python: >=3.10, <3.13
Description-Content-Type: text/markdown; charset=UTF-8; variant=GFM

# linkapy
A framework that encompasses a number of techniques applicable to scNMT-seq analysis.

# Installation

Note that a working (rustup)[https://rustup.rs/] installation is required. 
Secondly, if an appropriate python (>= 3.10, < 3.13) and pip version are installed, linkapy can be installed with:

  > pip install .  

Or alternatively, with a working maturin installation:

  > maturin develop --release

# Documentation

Note that this package is still in development and is prone to change without notice. 
A rudimentary [documentation](https://linkapy.readthedocs.io/en/latest/) is available.

