.coveragerc
.gitignore
.gitmodules
.readthedocs.yml
AGENTS.md
CLAUDE.md
CONTRIBUTING.md
Dockerfile
LICENSE
MANIFEST.in
Makefile
README.md
SECURITY.md
pyproject.toml
WDL/CLI.py
WDL/Env.py
WDL/Error.py
WDL/Expr.py
WDL/Lint.py
WDL/StdLib.py
WDL/Tree.py
WDL/Type.py
WDL/Value.py
WDL/Walker.py
WDL/Zip.py
WDL/__init__.py
WDL/__main__.py
WDL/_grammar.py
WDL/_grammar_old.py
WDL/_parser.py
WDL/_util.py
WDL/_version.py
WDL/py.typed
WDL/runtime/__init__.py
WDL/runtime/_io_helpers.py
WDL/runtime/_statusbar.py
WDL/runtime/_stdlib.py
WDL/runtime/_workflow_state.py
WDL/runtime/cache.py
WDL/runtime/config.py
WDL/runtime/download.py
WDL/runtime/error.py
WDL/runtime/task.py
WDL/runtime/task_container.py
WDL/runtime/workflow.py
WDL/runtime/backend/__init__.py
WDL/runtime/backend/cli_subprocess.py
WDL/runtime/backend/docker_swarm.py
WDL/runtime/backend/podman.py
WDL/runtime/backend/singularity.py
WDL/runtime/backend/udocker.py
WDL/runtime/config_templates/default.cfg
docs/FAQ.md
docs/Makefile
docs/WDL.rst
docs/add_functions.md
docs/assert.md
docs/check.rst
docs/conf.py
docs/getting_started.md
docs/index.rst
docs/input_template.rst
docs/miniwdl-logo.png
docs/runner_advanced.md
docs/runner_backends.md
docs/runner_cli.rst
docs/runner_reference.md
docs/trace_identifiers.md
docs/wdlviz.md
docs/wdlviz_ex1.png
docs/wdlviz_ex2.png
docs/zip.rst
examples/all_parameter_meta.py
examples/clean_download_cache.sh
examples/clean_download_cache.t
examples/paste_wdl_imports.py
examples/run_with_custom_error.py
examples/upload_output_files.sh
examples/wdlviz.py
examples/plugin_log_task_usage/StressTest.wdl
examples/plugin_log_task_usage/miniwdl_log_task_usage.py
examples/plugin_log_task_usage/setup.py
examples/plugin_s3_progressive_upload/miniwdl_s3_progressive_upload.py
examples/plugin_s3_progressive_upload/setup.py
examples/plugin_s3_progressive_upload/test.t
examples/plugin_task_omnibus/miniwdl_task_omnibus_example.py
examples/plugin_task_omnibus/setup.py
miniwdl.egg-info/PKG-INFO
miniwdl.egg-info/SOURCES.txt
miniwdl.egg-info/dependency_links.txt
miniwdl.egg-info/entry_points.txt
miniwdl.egg-info/requires.txt
miniwdl.egg-info/scm_file_list.json
miniwdl.egg-info/scm_version.json
miniwdl.egg-info/top_level.txt