.gitignore
.readthedocs.yaml
LICENSE
README.rst
justfile
pyproject.toml
.github/pull_request_template.md
.github/workflows/publish_release.yaml
.github/workflows/tests.yaml
docs/Makefile
docs/source/analysis.rst
docs/source/conf.py
docs/source/data_processing.rst
docs/source/hdf5er.rst
docs/source/index.rst
docs/source/lens.rst
docs/source/modules.rst
docs/source/onion.rst
docs/source/soap.rst
docs/source/time_soap.rst
docs/source/_static/EU_image.png
docs/source/_static/empty
docs/source/_static/ex_test_files/trajectory.xyz
docs/source/_static/onion/Fig0.png
docs/source/_static/onion/Fig1_1.png
docs/source/_static/onion/Fig2.png
docs/source/_static/onion/Fig3.png
docs/source/_static/onion/Fig4.png
docs/source/_static/onion/Time_resolution_analysis_1.png
docs/source/_templates/class.rst
docs/source/_templates/module.rst
examples/lens.py
examples/onion_multi.py
examples/onion_uni.py
examples/soap.py
src/dynsight/__init__.py
src/dynsight/analysis.py
src/dynsight/data_processing.py
src/dynsight/hdf5er.py
src/dynsight/lens.py
src/dynsight/onion.py
src/dynsight/py.typed
src/dynsight/soap.py
src/dynsight/utilities.py
src/dynsight.egg-info/PKG-INFO
src/dynsight.egg-info/SOURCES.txt
src/dynsight.egg-info/dependency_links.txt
src/dynsight.egg-info/requires.txt
src/dynsight.egg-info/top_level.txt
src/dynsight/_internal/__init__.py
src/dynsight/_internal/analysis/__init__.py
src/dynsight/_internal/analysis/entropy.py
src/dynsight/_internal/analysis/rdf.py
src/dynsight/_internal/analysis/spatial_average.py
src/dynsight/_internal/analysis/time_correlations.py
src/dynsight/_internal/data_processing/__init__.py
src/dynsight/_internal/data_processing/classify.py
src/dynsight/_internal/data_processing/distances.py
src/dynsight/_internal/hdf5er/__init__.py
src/dynsight/_internal/hdf5er/from_hdf5.py
src/dynsight/_internal/hdf5er/to_hdf5.py
src/dynsight/_internal/lens/__init__.py
src/dynsight/_internal/lens/lens.py
src/dynsight/_internal/onion/__init__.py
src/dynsight/_internal/soapify/__init__.py
src/dynsight/_internal/soapify/saponify.py
src/dynsight/_internal/timesoap/__init__.py
src/dynsight/_internal/timesoap/timesoap.py
src/dynsight/_internal/utilities/__init__.py
src/dynsight/_internal/utilities/utilities.py
tests/__init__.py
tests/octahedron_test.hdf5
tests/analysis/__init__.py
tests/analysis/test_sample_entropy.py
tests/analysis/test_shannon.py
tests/analysis/test_spatialaverage.py
tests/analysis/test_time_correlations.py
tests/analysis/rdf/__init__.py
tests/analysis/rdf/case_data.py
tests/analysis/rdf/conftest.py
tests/analysis/rdf/test_rdf.py
tests/analysis/rdf/test_rdf/test_bins_density.npy
tests/analysis/rdf/test_rdf/test_bins_none.npy
tests/analysis/rdf/test_rdf/test_bins_rdf.npy
tests/analysis/rdf/test_rdf/test_rdf_density.npy
tests/analysis/rdf/test_rdf/test_rdf_none.npy
tests/analysis/rdf/test_rdf/test_rdf_rdf.npy
tests/analysis/spavg/test_spavg.npy
tests/analysis/tcorr/c_corr.npy
tests/analysis/tcorr/ctd_dev.npy
tests/analysis/tcorr/std_dev.npy
tests/analysis/tcorr/t_corr.npy
tests/lens/__init__.py
tests/lens/conftest.py
tests/lens/test_lens.py
tests/lens/test_special_lens.py
tests/lens/to_remove_test_count_neigh.py
tests/lens/to_remove_test_emulate_lens.py
tests/lens/utilities.py
tests/onion/__init__.py
tests/onion/test_multi.py
tests/onion/test_uni.py
tests/onion/output_multi/2D_trajectory.npy
tests/onion/output_multi/labels.npy
tests/onion/output_uni/labels.npy
tests/soap/test_soap.py
tests/soap/test_tsoap.py
tests/systems/2_particles.hdf5
tests/systems/2_particles.xyz
tests/systems/LENS.npz
tests/systems/SOAP.npz
tests/systems/octahedron.hdf5
tests/systems/octahedron.xyz
tests/systems/tSOAP.npy
tests/systems/tSOAP.npz
tests/systems/coex/test_coex.gro
tests/systems/coex/test_coex.xtc
tests/utilities/test_utilities.py