LICENSE
MANIFEST.in
README.md
deploy.sh
lint.sh
pyproject.toml
test.sh
docs/design.md
docs/reference.md
docs/species.md
orfdata/__init__.py
orfdata/build.py
orfdata/catalog.py
orfdata/cli.py
orfdata/initiation_context.py
orfdata/model.py
orfdata/reference.py
orfdata/sequence.py
orfdata/version.py
orfdata.egg-info/PKG-INFO
orfdata.egg-info/SOURCES.txt
orfdata.egg-info/dependency_links.txt
orfdata.egg-info/entry_points.txt
orfdata.egg-info/requires.txt
orfdata.egg-info/top_level.txt
orfdata/data/orf-evidence/AUTHOR-LICENSE.txt
orfdata/data/orf-evidence/NOTICE.txt
orfdata/data/orf-evidence/catalog.json.gz
orfdata/data/orf-evidence/manifest.json
orfdata/data/uorf-evidence/AUTHOR-LICENSE.txt
orfdata/data/uorf-evidence/NOTICE.txt
orfdata/data/uorf-evidence/catalog.json.gz
orfdata/data/uorf-evidence/manifest.json
tests/test_initiation_context.py
tests/test_reference_context.py
tests/test_reference_orf.py
tests/test_uorf_catalog.py
tests/data/references/README.md
tests/data/references/canis_lupus_familiaris.json
tests/data/references/homo_sapiens.json
tests/data/references/mus_musculus.json
tests/data/references/saccharomyces_cerevisiae.json