DAY-EC activated.
DAY-EC activated.
=== status ===
{
  "command": "bin/day_run produce_ont_run_qc_and_demux_multiqc -p -j 5 -k --config run_context_file=config/runs.tsv samples_table=.test_data/data/samples.tsv units_table=.test_data/data/units.tsv",
  "completed_at": "2026-05-30T03:19:04Z",
  "exit_code": 1,
  "repo_path": "/fsx/analysis_results/ubuntu/ccv20260529r11_ont_run_qc/daylily-omics-analysis",
  "session_name": "ccv20260529r11_ont_run_qc",
  "started_at": "2026-05-30T03:17:17Z"
}
=== repo ===
/fsx/analysis_results/ubuntu/ccv20260529r11_ont_run_qc/daylily-omics-analysis
=== latest snakemake logs ===
1780111143.0000000000 .snakemake/log/2026-05-30T031739.508736.snakemake.log
1780111147.0000000000 .snakemake/log/2026-05-30T031905.131345.snakemake.log
=== latest log path: .snakemake/log/2026-05-30T031905.131345.snakemake.log ===
=== latest log tail ===
Unlocking working directory.
=== rule logs with errors ===
results/runs/20260513_ONT_HG003/run_qc/ont/logs/demux_fastq_qc.log:5:error: Found argument '/fsx/run_dir_mounts/20260513_ONT_HG003/HG003/20260513_2149_1D_PBM13745_5a9ea63e/fastq_fail/barcode01/PBM13745_fail_barcode01_5a9ea63e_ee86bd52_0.fastq.gz' which wasn't expected, or isn't valid in this context
results/runs/20260513_ONT_HG003/run_qc/ont/logs/pycoqc.log:29:Traceback (most recent call last):
results/runs/20260513_ONT_HG003/run_qc/ont/logs/pycoqc.log:68:ValueError: sort array is read-only
