entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 58 accession B7UR04 name YTJA_ECO27 protein recommendedName fullName evidence 1 UPF0391-membrane-protein-YtjA gene name evidence 1 type primary ytjA name type ordered-locus E2348C_4674 organism name type scientific Escherichia-coli-O127:H6-(strain-E2348/69-/-EPEC) dbReference id 574521 type NCBI-Taxonomy lineage taxon Bacteria taxon Proteobacteria taxon Gammaproteobacteria taxon Enterobacterales taxon Enterobacteriaceae taxon Escherichia reference key 1 citation date 2009 first 347 last 354 name J.-Bacteriol. type journal-article volume 191 title Complete-genome-sequence-and-comparative-genome-analysis-of-enteropathogenic-Escherichia-coli-O127:H6-strain-E2348/69. authorList person name Iguchi-A. person name Thomson-N.R. person name Ogura-Y. person name Saunders-D. person name Ooka-T. person name Henderson-I.R. person name Harris-D. person name Asadulghani-M. person name Kurokawa-K. person name Dean-P. person name Kenny-B. person name Quail-M.A. person name Thurston-S. person name Dougan-G. person name Hayashi-T. person name Parkhill-J. person name Frankel-G. dbReference id 18952797 type PubMed dbReference id 10.1128/jb.01238-08 type DOI scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain E2348/69-/-EPEC comment type subcellular-location subcellularLocation location evidence 1 Cell-membrane topology evidence 1 Multi-pass-membrane-protein comment type similarity text evidence 1 Belongs-to-the-UPF0391-family. dbReference id FM180568 type EMBL property type protein-sequence-ID value CAS12222.1 property type molecule-type value Genomic_DNA dbReference id WP_000490275.1 type RefSeq property type nucleotide-sequence-ID value NC_011601.1 dbReference id B7UR04 type AlphaFoldDB dbReference id CAS12222 type EnsemblBacteria property type protein-sequence-ID value CAS12222 property type gene-ID value E2348C_4674 dbReference id 67416053 type GeneID dbReference id 69472677 type GeneID dbReference id ecg:E2348C_4674 type KEGG dbReference id CLU_187346_2_0_6 type HOGENOM dbReference id LRWTVIF type OMA dbReference id UP000008205 type Proteomes property type component value Chromosome dbReference id GO:0005886 type GO property type term value C:plasma-membrane property type evidence value ECO:0007669 property type project value UniProtKB-SubCell dbReference id MF_01361 type HAMAP property type entry-name value UPF0391 property type match-status value 1 dbReference id IPR009760 type InterPro property type entry-name value DUF1328 dbReference id PF07043 type Pfam property type entry-name value DUF1328 property type match-status value 1 dbReference id PIRSF036466 type PIRSF property type entry-name value UCP036466 property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-1003 Cell-membrane keyword id KW-0472 Membrane keyword id KW-1185 Reference-proteome keyword id KW-0812 Transmembrane keyword id KW-1133 Transmembrane-helix feature description UPF0391-membrane-protein-YtjA id PRO_1000166687 type chain location begin position 1 end position 53 feature description Helical evidence 1 type transmembrane-region location begin position 4 end position 24 feature description Helical evidence 1 type transmembrane-region location begin position 30 end position 48 evidence key 1 type ECO:0000255 source dbReference id MF_01361 type HAMAP-Rule sequence checksum E787FA90AE424536 length 53 mass 5536 modified 2009-02-10 version 1 MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 59 accession B7JI81 name HUTP_BACC0 protein recommendedName fullName evidence 1 Hut-operon-positive-regulatory-protein gene name evidence 1 type primary hutP name type ordered-locus BCAH820_3663 organism name type scientific Bacillus-cereus-(strain-AH820) dbReference id 405535 type NCBI-Taxonomy lineage taxon Bacteria taxon Firmicutes taxon Bacilli taxon Bacillales taxon Bacillaceae taxon Bacillus taxon Bacillus-cereus-group reference key 1 citation date 2008-10 db EMBL/GenBank/DDBJ-databases type submission title Genome-sequence-of-Bacillus-cereus-AH820. authorList person name Dodson-R.J. person name Durkin-A.S. person name Rosovitz-M.J. person name Rasko-D.A. person name Hoffmaster-A. person name Ravel-J. person name Sutton-G. scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain AH820 comment type function text evidence 1 Antiterminator-that-binds-to-cis-acting-regulatory-sequences-on-the-mRNA-in-the-presence-of-histidine,-thereby-suppressing-transcription-termination-and-activating-the-hut-operon-for-histidine-utilization. comment type subunit text evidence 1 Homohexamer. comment type similarity text evidence 1 Belongs-to-the-HutP-family. dbReference id CP001283 type EMBL property type protein-sequence-ID value ACK88789.1 property type molecule-type value Genomic_DNA dbReference id WP_000926522.1 type RefSeq property type nucleotide-sequence-ID value NC_011773.1 dbReference id B7JI81 type AlphaFoldDB dbReference id B7JI81 type SMR dbReference id ACK88789 type EnsemblBacteria property type protein-sequence-ID value ACK88789 property type gene-ID value BCAH820_3663 dbReference id bcu:BCAH820_3663 type KEGG dbReference id CLU_148478_0_0_9 type HOGENOM dbReference id REMHALY type OMA dbReference id UP000001363 type Proteomes property type component value Chromosome dbReference id GO:0003729 type GO property type term value F:mRNA-binding property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id GO:0006547 type GO property type term value P:histidine-metabolic-process property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id GO:0010628 type GO property type term value P:positive-regulation-of-gene-expression property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id 3.40.1510.10 type Gene3D property type entry-name value Hut-operon-regulatory-protein-HutP property type match-status value 1 dbReference id MF_00779 type HAMAP property type entry-name value HutP property type match-status value 1 dbReference id IPR015111 type InterPro property type entry-name value Regulatory_HutP dbReference id IPR023552 type InterPro property type entry-name value Regulatory_HutP_bacillales dbReference id IPR036482 type InterPro property type entry-name value Regulatory_HutP_sf dbReference id PF09021 type Pfam property type entry-name value HutP property type match-status value 1 dbReference id SSF111064 type SUPFAM property type entry-name value Hut-operon-positive-regulatory-protein-HutP property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-0010 Activator keyword id KW-0369 Histidine-metabolism keyword id KW-0694 RNA-binding keyword id KW-0804 Transcription keyword id KW-0805 Transcription-regulation feature description Hut-operon-positive-regulatory-protein id PRO_1000148459 type chain location begin position 1 end position 146 evidence key 1 type ECO:0000255 source dbReference id MF_00779 type HAMAP-Rule sequence checksum EB176479A3BEAA09 length 146 mass 15821 modified 2009-02-10 version 1 MLLQGTHRIGRMAMLLALADQNESPVLSIPKGWKYCTGKVGSMNSQKVVAAMETAAKSNQVIETDVYRETHALYHAIMEALYGVTRGQIQLADVLRTVGLRFAIVRGTPYDGKKEGEWVAVALYGTIGAPVKGSEHEAIGLGINHI 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 60 accession B7ISJ3 name HUTP_BACC2 protein recommendedName fullName evidence 1 Hut-operon-positive-regulatory-protein gene name evidence 1 type primary hutP name type ordered-locus BCG9842_B1555 organism name type scientific Bacillus-cereus-(strain-G9842) dbReference id 405531 type NCBI-Taxonomy lineage taxon Bacteria taxon Firmicutes taxon Bacilli taxon Bacillales taxon Bacillaceae taxon Bacillus taxon Bacillus-cereus-group reference key 1 citation date 2008-10 db EMBL/GenBank/DDBJ-databases type submission title Genome-sequence-of-Bacillus-cereus-G9842. authorList person name Dodson-R.J. person name Durkin-A.S. person name Rosovitz-M.J. person name Rasko-D.A. person name Hoffmaster-A. person name Ravel-J. person name Sutton-G. scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain G9842 comment type function text evidence 1 Antiterminator-that-binds-to-cis-acting-regulatory-sequences-on-the-mRNA-in-the-presence-of-histidine,-thereby-suppressing-transcription-termination-and-activating-the-hut-operon-for-histidine-utilization. comment type subunit text evidence 1 Homohexamer. comment type similarity text evidence 1 Belongs-to-the-HutP-family. dbReference id CP001186 type EMBL property type protein-sequence-ID value ACK96817.1 property type molecule-type value Genomic_DNA dbReference id WP_000926515.1 type RefSeq property type nucleotide-sequence-ID value NC_011772.1 dbReference id B7ISJ3 type AlphaFoldDB dbReference id B7ISJ3 type SMR dbReference id ACK96817 type EnsemblBacteria property type protein-sequence-ID value ACK96817 property type gene-ID value BCG9842_B1555 dbReference id bcg:BCG9842_B1555 type KEGG dbReference id CLU_148478_0_0_9 type HOGENOM dbReference id REMHALY type OMA dbReference id UP000006744 type Proteomes property type component value Chromosome dbReference id GO:0003729 type GO property type term value F:mRNA-binding property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id GO:0006547 type GO property type term value P:histidine-metabolic-process property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id GO:0010628 type GO property type term value P:positive-regulation-of-gene-expression property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id 3.40.1510.10 type Gene3D property type entry-name value Hut-operon-regulatory-protein-HutP property type match-status value 1 dbReference id MF_00779 type HAMAP property type entry-name value HutP property type match-status value 1 dbReference id IPR015111 type InterPro property type entry-name value Regulatory_HutP dbReference id IPR023552 type InterPro property type entry-name value Regulatory_HutP_bacillales dbReference id IPR036482 type InterPro property type entry-name value Regulatory_HutP_sf dbReference id PF09021 type Pfam property type entry-name value HutP property type match-status value 1 dbReference id SSF111064 type SUPFAM property type entry-name value Hut-operon-positive-regulatory-protein-HutP property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-0010 Activator keyword id KW-0369 Histidine-metabolism keyword id KW-0694 RNA-binding keyword id KW-0804 Transcription keyword id KW-0805 Transcription-regulation feature description Hut-operon-positive-regulatory-protein id PRO_1000148460 type chain location begin position 1 end position 146 evidence key 1 type ECO:0000255 source dbReference id MF_00779 type HAMAP-Rule sequence checksum 9569646463B76FE7 length 146 mass 15877 modified 2009-02-10 version 1 MLLQGTHRIGRMAMLLALADENESPVLSIPKGWKYCTGKVGSMNSQKVVAAMETAAKSNQVIETDVYRETHALYHAIMEALYGVTRGQIQLADVLRTVGLRFAIVRGRPYDGKKEGEWVAVALYGTIGAPVKGSEHEAIGLGINHI 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 61 accession B8FUT0 name MINE_DESHD protein recommendedName fullName evidence 1 Cell-division-topological-specificity-factor gene name evidence 1 type primary minE name type ordered-locus Dhaf_4345 organism name type scientific Desulfitobacterium-hafniense-(strain-DSM-10664-/-DCB-2) dbReference id 272564 type NCBI-Taxonomy lineage taxon Bacteria taxon Firmicutes taxon Clostridia taxon Eubacteriales taxon Desulfitobacteriaceae taxon Desulfitobacterium reference key 1 citation date 2012 first 21 last 21 name BMC-Microbiol. type journal-article volume 12 title Genome-sequence-of-Desulfitobacterium-hafniense-DCB-2,-a-Gram-positive-anaerobe-capable-of-dehalogenation-and-metal-reduction. authorList person name Kim-S.H. person name Harzman-C. person name Davis-J.K. person name Hutcheson-R. person name Broderick-J.B. person name Marsh-T.L. person name Tiedje-J.M. dbReference id 22316246 type PubMed dbReference id 10.1186/1471-2180-12-21 type DOI scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain DSM-10664-/-DCB-2 comment type function text evidence 1 Prevents-the-cell-division-inhibition-by-proteins-MinC-and-MinD-at-internal-division-sites-while-permitting-inhibition-at-polar-sites.-This-ensures-cell-division-at-the-proper-site-by-restricting-the-formation-of-a-division-septum-at-the-midpoint-of-the-long-axis-of-the-cell. comment type similarity text evidence 1 Belongs-to-the-MinE-family. dbReference id CP001336 type EMBL property type protein-sequence-ID value ACL22350.1 property type molecule-type value Genomic_DNA dbReference id WP_005816777.1 type RefSeq property type nucleotide-sequence-ID value NC_011830.1 dbReference id B8FUT0 type AlphaFoldDB dbReference id B8FUT0 type SMR dbReference id ACL22350 type EnsemblBacteria property type protein-sequence-ID value ACL22350 property type gene-ID value Dhaf_4345 dbReference id dhd:Dhaf_4345 type KEGG dbReference id CLU_137929_1_1_9 type HOGENOM dbReference id VHDRANV type OMA dbReference id UP000007726 type Proteomes property type component value Chromosome dbReference id GO:0007049 type GO property type term value P:cell-cycle property type evidence value ECO:0007669 property type project value UniProtKB-KW dbReference id GO:0051301 type GO property type term value P:cell-division property type evidence value ECO:0007669 property type project value UniProtKB-KW dbReference id GO:0032955 type GO property type term value P:regulation-of-division-septum-assembly property type evidence value ECO:0007669 property type project value InterPro dbReference id 3.30.1070.10 type Gene3D property type entry-name value Cell-division-topological-specificity-factor-MinE property type match-status value 1 dbReference id MF_00262 type HAMAP property type entry-name value MinE property type match-status value 1 dbReference id IPR005527 type InterPro property type entry-name value MinE dbReference id IPR036707 type InterPro property type entry-name value MinE_sf dbReference id PF03776 type Pfam property type entry-name value MinE property type match-status value 1 dbReference id SSF55229 type SUPFAM property type entry-name value Cell-division-protein-MinE-topological-specificity-domain property type match-status value 1 dbReference id TIGR01215 type TIGRFAMs property type entry-name value minE property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-0131 Cell-cycle keyword id KW-0132 Cell-division feature description Cell-division-topological-specificity-factor id PRO_1000191274 type chain location begin position 1 end position 91 evidence key 1 type ECO:0000255 source dbReference id MF_00262 type HAMAP-Rule sequence checksum 3AE111ED5467A9AE length 91 mass 10417 modified 2009-03-03 version 1 MLEFISRMLGKEPASKNVAKERLRLVLVHDRATISPHMLNQLKEDLIKVISNYMEIDEGALEVNLNQDDREVALIANIPVIKMKRDYSVKG 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 61 accession B9EAQ8 name MECA_MACCJ protein recommendedName fullName evidence 1 Adapter-protein-MecA gene name evidence 1 type primary mecA name type ordered-locus MCCL_0612 organism name type scientific Macrococcus-caseolyticus-(strain-JCSC5402) dbReference id 458233 type NCBI-Taxonomy lineage taxon Bacteria taxon Firmicutes taxon Bacilli taxon Bacillales taxon Staphylococcaceae taxon Macrococcus reference key 1 citation date 2009 first 1180 last 1190 name J.-Bacteriol. type journal-article volume 191 title Complete-genome-sequence-of-Macrococcus-caseolyticus-strain-JCSCS5402,-reflecting-the-ancestral-genome-of-the-human-pathogenic-staphylococci. authorList person name Baba-T. person name Kuwahara-Arai-K. person name Uchiyama-I. person name Takeuchi-F. person name Ito-T. person name Hiramatsu-K. dbReference id 19074389 type PubMed dbReference id 10.1128/jb.01058-08 type DOI scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain JCSC5402 comment type function text evidence 1 Enables-the-recognition-and-targeting-of-unfolded-and-aggregated-proteins-to-the-ClpC-protease-or-to-other-proteins-involved-in-proteolysis. comment type subunit text evidence 1 Homodimer. comment type domain text The-N-terminal-domain-probably-binds-unfolded/aggregated-proteins;-the-C-terminal-domain-interacts-with-ClpC. comment type similarity text evidence 1 Belongs-to-the-MecA-family. dbReference id AP009484 type EMBL property type protein-sequence-ID value BAH17319.1 property type molecule-type value Genomic_DNA dbReference id WP_012656520.1 type RefSeq property type nucleotide-sequence-ID value NC_011999.1 dbReference id B9EAQ8 type AlphaFoldDB dbReference id B9EAQ8 type SMR dbReference id 458233.MCCL_0612 type STRING dbReference id BAH17319 type EnsemblBacteria property type protein-sequence-ID value BAH17319 property type gene-ID value MCCL_0612 dbReference id 61129507 type GeneID dbReference id mcl:MCCL_0612 type KEGG dbReference id COG4862 type eggNOG property type taxonomic-scope value Bacteria dbReference id CLU_071496_2_1_9 type HOGENOM dbReference id EFFYTVM type OMA dbReference id 2360201at2 type OrthoDB dbReference id UP000001383 type Proteomes property type component value Chromosome dbReference id GO:0030674 type GO property type term value F:protein-macromolecule-adaptor-activity property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id 3.30.70.1950 type Gene3D property type match-status value 1 dbReference id MF_01124 type HAMAP property type entry-name value MecA property type match-status value 1 dbReference id IPR038471 type InterPro property type entry-name value MecA_C_sf dbReference id IPR008681 type InterPro property type entry-name value Neg-reg_MecA dbReference id PTHR39161 type PANTHER property type entry-name value ADAPTER-PROTEIN-MECA property type match-status value 1 dbReference id PTHR39161:SF1 type PANTHER property type entry-name value ADAPTER-PROTEIN-MECA-1 property type match-status value 1 dbReference id PF05389 type Pfam property type entry-name value MecA property type match-status value 1 dbReference id PIRSF029008 type PIRSF property type entry-name value MecA property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-1185 Reference-proteome feature description Adapter-protein-MecA id PRO_1000164053 type chain location begin position 1 end position 220 evidence key 1 type ECO:0000255 source dbReference id MF_01124 type HAMAP-Rule sequence checksum 0B8132BDAE3295F2 length 220 mass 26539 modified 2009-03-24 version 1 MRIERVNESTLKFYLTYTDIEARGFKRDDLWTSRKKGEEFFWSVMEEVNQEEDFFFDGPLWIQVHAFDKGIEVVVTKSKNDDLQLPEDDSDLNIDEKVNDFINNSMHSDSELRDLLMRASEESTEQFFIVHFDDLEDVIQFSYHNYEDVDIEDLLYMYEGKYYYYVEFDDHMSEDAIHSYIAHLLEYANETQISHEQLDEYGKIVMSHNVKRQVKQYFKQ 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 65 accession A8AM04 name DNAT_CITK8 protein recommendedName fullName evidence 1 Primosomal-protein-1 alternativeName fullName evidence 1 Primosomal-protein-I gene name evidence 1 type primary dnaT name type ordered-locus CKO_03437 organism name type scientific Citrobacter-koseri-(strain-ATCC-BAA-895-/-CDC-4225-83-/-SGSC4696) dbReference id 290338 type NCBI-Taxonomy lineage taxon Bacteria taxon Proteobacteria taxon Gammaproteobacteria taxon Enterobacterales taxon Enterobacteriaceae taxon Citrobacter reference key 1 citation date 2007-08 db EMBL/GenBank/DDBJ-databases type submission authorList consortium name The-Citrobacter-koseri-Genome-Sequencing-Project person name McClelland-M. person name Sanderson-E.K. person name Porwollik-S. person name Spieth-J. person name Clifton-W.S. person name Latreille-P. person name Courtney-L. person name Wang-C. person name Pepin-K. person name Bhonagiri-V. person name Nash-W. person name Johnson-M. person name Thiruvilangam-P. person name Wilson-R. scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain ATCC-BAA-895-/-CDC-4225-83-/-SGSC4696 comment type function text evidence 1 This-protein-is-required-for-primosome-dependent-normal-DNA-replication;-it-is-also-involved-in-inducing-stable-DNA-replication-during-SOS-response.-It-forms,-in-concert-with-DnaB-protein-and-other-prepriming-proteins-DnaC,-N,-N',-N''-a-prepriming-protein-complex-on-the-specific-site-of-the-template-DNA-recognized-by-protein-N'. comment type similarity text evidence 1 Belongs-to-the-DnaT-family. dbReference id CP000822 type EMBL property type protein-sequence-ID value ABV14517.1 property type molecule-type value Genomic_DNA dbReference id WP_012134218.1 type RefSeq property type nucleotide-sequence-ID value NC_009792.1 dbReference id A8AM04 type AlphaFoldDB dbReference id A8AM04 type SMR dbReference id 290338.CKO_03437 type STRING dbReference id ABV14517 type EnsemblBacteria property type protein-sequence-ID value ABV14517 property type gene-ID value CKO_03437 dbReference id 45137189 type GeneID dbReference id cko:CKO_03437 type KEGG dbReference id CLU_1501592_0_0_6 type HOGENOM dbReference id ASFVAYW type OMA dbReference id 6630498at2 type OrthoDB dbReference id UP000008148 type Proteomes property type component value Chromosome dbReference id GO:1990077 type GO property type term value C:primosome-complex property type evidence value ECO:0007669 property type project value UniProtKB-KW dbReference id GO:0006269 type GO property type term value P:DNA-replication,-synthesis-of-RNA-primer property type evidence value ECO:0007669 property type project value UniProtKB-UniRule dbReference id 1.10.8.1180 type Gene3D property type match-status value 1 dbReference id MF_01061 type HAMAP property type entry-name value DnaT property type match-status value 1 dbReference id IPR020917 type InterPro property type entry-name value DnaT dbReference id IPR040480 type InterPro property type entry-name value DnaT_DNA_bind dbReference id PF17948 type Pfam property type entry-name value DnaT property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-0235 DNA-replication keyword id KW-0639 Primosome keyword id KW-1185 Reference-proteome feature description Primosomal-protein-1 id PRO_1000149688 type chain location begin position 1 end position 179 feature description Disordered evidence 2 type region-of-interest location begin position 155 end position 179 evidence key 1 type ECO:0000255 source dbReference id MF_01061 type HAMAP-Rule evidence key 2 type ECO:0000256 source dbReference id MobiDB-lite type SAM sequence checksum 697857174E31E8AD length 179 mass 19445 modified 2007-10-23 version 1 MSSRILTPDVIGIDALLHDHNAVLAKSASGAVAVFANNAPAFYAVTPARLAELLALEEKLSRPGSDVTLDAQLYEDSQAAPVAVPLGKFAMYADWQPDANFQRQAALWGVALREPVTAEELASFVAYWQAEGKIFHHIQWQQKLARSVQISRASNGGMPKRDVNNVSEPDDHIPPGFRG 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 86 accession A6Q6S7 name Y226_SULNB protein recommendedName fullName evidence 1 UPF0234-protein-SUN_0226 gene name type ordered-locus SUN_0226 organism name type scientific Sulfurovum-sp.-(strain-NBC37-1) dbReference id 387093 type NCBI-Taxonomy lineage taxon Bacteria taxon Proteobacteria taxon Epsilonproteobacteria taxon Campylobacterales taxon Sulfurovaceae taxon Sulfurovum reference key 1 citation date 2007 first 12146 last 12150 name Proc.-Natl.-Acad.-Sci.-U.S.A. type journal-article volume 104 title Deep-sea-vent-epsilon-proteobacterial-genomes-provide-insights-into-emergence-of-pathogens. authorList person name Nakagawa-S. person name Takaki-Y. person name Shimamura-S. person name Reysenbach-A.-L. person name Takai-K. person name Horikoshi-K. dbReference id 17615243 type PubMed dbReference id 10.1073/pnas.0700687104 type DOI scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain NBC37-1 comment type similarity text evidence 1 Belongs-to-the-UPF0234-family. dbReference id AP009179 type EMBL property type protein-sequence-ID value BAF71186.1 property type molecule-type value Genomic_DNA dbReference id WP_011979919.1 type RefSeq property type nucleotide-sequence-ID value NC_009663.1 dbReference id A6Q6S7 type AlphaFoldDB dbReference id A6Q6S7 type SMR dbReference id 387093.SUN_0226 type STRING dbReference id BAF71186 type EnsemblBacteria property type protein-sequence-ID value BAF71186 property type gene-ID value SUN_0226 dbReference id sun:SUN_0226 type KEGG dbReference id COG1666 type eggNOG property type taxonomic-scope value Bacteria dbReference id CLU_099839_1_0_7 type HOGENOM dbReference id SDFDRQE type OMA dbReference id 9801447at2 type OrthoDB dbReference id UP000006378 type Proteomes property type component value Chromosome dbReference id cd11740 type CDD property type entry-name value YajQ_like property type match-status value 1 dbReference id 3.30.70.860 type Gene3D property type match-status value 1 dbReference id 3.30.70.990 type Gene3D property type entry-name value YajQ-like,-domain-2 property type match-status value 1 dbReference id MF_00632 type HAMAP property type entry-name value UPF0234 property type match-status value 1 dbReference id IPR007551 type InterPro property type entry-name value DUF520 dbReference id IPR035571 type InterPro property type entry-name value UPF0234-like_C dbReference id IPR035570 type InterPro property type entry-name value UPF0234_N dbReference id IPR036183 type InterPro property type entry-name value YajQ-like_sf dbReference id PTHR30476 type PANTHER property type entry-name value UNCHARACTERIZED property type match-status value 1 dbReference id PTHR30476:SF0 type PANTHER property type entry-name value UPF0234-PROTEIN-YAJQ property type match-status value 1 dbReference id PF04461 type Pfam property type entry-name value DUF520 property type match-status value 1 dbReference id SSF89963 type SUPFAM property type entry-name value YajQ-like property type match-status value 2 proteinExistence type inferred-from-homology keyword id KW-1185 Reference-proteome feature description UPF0234-protein-SUN_0226 id PRO_1000147326 type chain location begin position 1 end position 166 evidence key 1 type ECO:0000255 source dbReference id MF_00632 type HAMAP-Rule sequence checksum 1CF79F9A2C8C7FF0 length 166 mass 18496 modified 2007-08-21 version 1 MAKDHYFDISAKLDMMEMKNAIEQAKKEVSTRFDFKGIMVEIDLNEKAKVLNLSSSSDSKIDALKDIVMSKMIKRGLSTKSLDEVKTEGISGGNVKVVYRIVDSIEKDEAKKIVKAIKDAKLKVTPSIQGDEIRVTGKKIDDLQAVIALVKQMEDLKAPLTFGNFK 
entry created 2009-07-28 dataset Swiss-Prot modified 2023-02-22 version 86 accession Q73TQ5 name Y3663_MYCPA protein recommendedName fullName Uncharacterized-methyltransferase-MAP_3663c ecNumber 2.1.1.- gene name type ordered-locus MAP_3663c organism name type scientific Mycolicibacterium-paratuberculosis-(strain-ATCC-BAA-968-/-K-10) name type common Mycobacterium-paratuberculosis dbReference id 262316 type NCBI-Taxonomy lineage taxon Bacteria taxon Actinobacteria taxon Corynebacteriales taxon Mycobacteriaceae taxon Mycobacterium taxon Mycobacterium-avium-complex-(MAC) reference key 1 citation date 2005 first 12344 last 12349 name Proc.-Natl.-Acad.-Sci.-U.S.A. type journal-article volume 102 title The-complete-genome-sequence-of-Mycobacterium-avium-subspecies-paratuberculosis. authorList person name Li-L. person name Bannantine-J.P. person name Zhang-Q. person name Amonsin-A. person name May-B.J. person name Alt-D. person name Banerji-N. person name Kanjilal-S. person name Kapur-V. dbReference id 16116077 type PubMed dbReference id 10.1073/pnas.0505662102 type DOI scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain ATCC-BAA-968-/-K-10 comment type similarity text evidence 1 Belongs-to-the-methyltransferase-superfamily. dbReference id 2.1.1.- type EC dbReference id AE016958 type EMBL property type protein-sequence-ID value AAS06213.1 property type molecule-type value Genomic_DNA dbReference id WP_003879122.1 type RefSeq property type nucleotide-sequence-ID value NC_002944.2 dbReference id Q73TQ5 type AlphaFoldDB dbReference id Q73TQ5 type SMR dbReference id 262316.MAP_3663c type STRING dbReference id AAS06213 type EnsemblBacteria property type protein-sequence-ID value AAS06213 property type gene-ID value MAP_3663c dbReference id mpa:MAP_3663c type KEGG dbReference id fig|262316.17.peg.3896 type PATRIC dbReference id COG0500 type eggNOG property type taxonomic-scope value Bacteria dbReference id CLU_073035_0_0_11 type HOGENOM dbReference id TNWLSPW type OMA dbReference id UP000000580 type Proteomes property type component value Chromosome dbReference id GO:0008168 type GO property type term value F:methyltransferase-activity property type evidence value ECO:0007669 property type project value UniProtKB-KW dbReference id GO:0032259 type GO property type term value P:methylation property type evidence value ECO:0007669 property type project value UniProtKB-KW dbReference id cd02440 type CDD property type entry-name value AdoMet_MTases property type match-status value 1 dbReference id 3.40.50.150 type Gene3D property type entry-name value Vaccinia-Virus-protein-VP39 property type match-status value 1 dbReference id IPR013216 type InterPro property type entry-name value Methyltransf_11 dbReference id IPR029063 type InterPro property type entry-name value SAM-dependent_MTases_sf dbReference id PTHR43591 type PANTHER property type entry-name value METHYLTRANSFERASE property type match-status value 1 dbReference id PF08241 type Pfam property type entry-name value Methyltransf_11 property type match-status value 1 dbReference id SSF53335 type SUPFAM property type entry-name value S-adenosyl-L-methionine-dependent-methyltransferases property type match-status value 1 proteinExistence type inferred-from-homology keyword id KW-0489 Methyltransferase keyword id KW-1185 Reference-proteome keyword id KW-0808 Transferase feature description Uncharacterized-methyltransferase-MAP_3663c id PRO_0000380604 type chain location begin position 1 end position 255 evidence key 1 type ECO:0000305 sequence checksum 0748551C8D9A7237 length 255 mass 27228 modified 2004-07-05 version 1 MAVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGRTLLDVGGGPGYFAAAFTDAGVRYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTVWLGPFGGHEMGLTHYLGGARAAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVLREFLVSNLVLVLQPQ 
entry created 2009-09-01 dataset Swiss-Prot modified 2023-02-22 version 31 accession B1P1W2 name SDHF2_ARTSF protein recommendedName fullName evidence 1 Succinate-dehydrogenase-assembly-factor-2,-mitochondrial shortName evidence 1 SDH-assembly-factor-2 shortName evidence 1 SDHAF2 organism name type scientific Artemia-franciscana name type common Brine-shrimp name type synonym Artemia-sanfranciscana dbReference id 6661 type NCBI-Taxonomy lineage taxon Eukaryota taxon Metazoa taxon Ecdysozoa taxon Arthropoda taxon Crustacea taxon Branchiopoda taxon Anostraca taxon Artemiidae taxon Artemia reference key 1 citation date 2007-10 db EMBL/GenBank/DDBJ-databases type submission title Isolation-of-mRNA-from-Artemia-franciscana-for-a-hypothetical-protein. authorList person name Buldo-Licciardi-J. person name Healey-M. person name Vershon-A.K. person name Nemeroff-M.E. scope NUCLEOTIDE-SEQUENCE-[MRNA] comment type function text evidence 1 Plays-an-essential-role-in-the-assembly-of-succinate-dehydrogenase-(SDH),-an-enzyme-complex-(also-referred-to-as-respiratory-complex-II)-that-is-a-component-of-both-the-tricarboxylic-acid-(TCA)-cycle-and-the-mitochondrial-electron-transport-chain,-and-which-couples-the-oxidation-of-succinate-to-fumarate-with-the-reduction-of-ubiquinone-(coenzyme-Q)-to-ubiquinol.-Required-for-flavinylation-(covalent-attachment-of-FAD)-of-the-flavoprotein-subunit-of-the-SDH-catalytic-dimer. comment type subunit text evidence 1 Interacts-with-the-flavoprotein-subunit-within-the-SDH-catalytic-dimer. comment type subcellular-location subcellularLocation location evidence 1 Mitochondrion-matrix comment type miscellaneous text evidence 1 This-protein-may-be-expected-to-contain-an-N-terminal-transit-peptide-but-none-has-been-predicted. comment type similarity text evidence 1 Belongs-to-the-SDHAF2-family. dbReference id EU251058 type EMBL property type protein-sequence-ID value ACB05780.1 property type molecule-type value mRNA dbReference id B1P1W2 type AlphaFoldDB dbReference id B1P1W2 type SMR dbReference id GO:0005759 type GO property type term value C:mitochondrial-matrix property type evidence value ECO:0007669 property type project value UniProtKB-SubCell dbReference id GO:0005739 type GO property type term value C:mitochondrion property type evidence value ECO:0000250 property type project value UniProtKB dbReference id GO:0006121 type GO property type term value P:mitochondrial-electron-transport,-succinate-to-ubiquinone property type evidence value ECO:0000250 property type project value UniProtKB dbReference id GO:0018293 type GO property type term value P:protein-FAD-linkage property type evidence value ECO:0000250 property type project value UniProtKB dbReference id 1.10.150.250 type Gene3D property type entry-name value Flavinator-of-succinate-dehydrogenase property type match-status value 1 dbReference id MF_03057 type HAMAP property type entry-name value SDHAF2 property type match-status value 1 dbReference id IPR005631 type InterPro property type entry-name value SDH dbReference id IPR036714 type InterPro property type entry-name value SDH_sf dbReference id IPR028882 type InterPro property type entry-name value SDHAF2 dbReference id PTHR12469 type PANTHER property type entry-name value PROTEIN-EMI5-HOMOLOG,-MITOCHONDRIAL property type match-status value 1 dbReference id PTHR12469:SF2 type PANTHER property type entry-name value SUCCINATE-DEHYDROGENASE-ASSEMBLY-FACTOR-2,-MITOCHONDRIAL property type match-status value 1 dbReference id PF03937 type Pfam property type entry-name value Sdh5 property type match-status value 1 dbReference id SSF109910 type SUPFAM property type entry-name value YgfY-like property type match-status value 1 proteinExistence type evidence-at-transcript-level keyword id KW-0143 Chaperone keyword id KW-0496 Mitochondrion feature description Succinate-dehydrogenase-assembly-factor-2,-mitochondrial id PRO_0000383160 type chain location begin position 1 end position 137 evidence key 1 type ECO:0000255 source dbReference id MF_03057 type HAMAP-Rule sequence checksum 2EA5A2E77D4E4310 length 137 mass 16208 modified 2008-04-29 version 1 MYLRSIMRGVIERVQLPFVIHIRKLSSEMPDGGLYPAPDHIVEPWIPPYEERKNEPVEIKRARLLYQSRKRGMLENCLLLSTFAKKFLHSMTPLQLDQYDRLINLPSNDWDIYNWSVGVKPTPEEFETEVMDMLKSM 
entry created 2009-09-01 dataset Swiss-Prot modified 2023-02-22 version 56 accession A9BNV7 name Y5373_DELAS protein recommendedName fullName evidence 1 UPF0502-protein-Daci_5373 gene name type ordered-locus Daci_5373 organism name type scientific Delftia-acidovorans-(strain-DSM-14801-/-SPH-1) dbReference id 398578 type NCBI-Taxonomy lineage taxon Bacteria taxon Proteobacteria taxon Betaproteobacteria taxon Burkholderiales taxon Comamonadaceae taxon Delftia reference key 1 citation date 2007-11 db EMBL/GenBank/DDBJ-databases type submission title Complete-sequence-of-Delftia-acidovorans-DSM-14801-/-SPH-1. authorList person name Copeland-A. person name Lucas-S. person name Lapidus-A. person name Barry-K. person name Glavina-del-Rio-T. person name Dalin-E. person name Tice-H. person name Pitluck-S. person name Lowry-S. person name Clum-A. person name Schmutz-J. person name Larimer-F. person name Land-M. person name Hauser-L. person name Kyrpides-N. person name Kim-E. person name Schleheck-D. person name Richardson-P. scope NUCLEOTIDE-SEQUENCE-[LARGE-SCALE-GENOMIC-DNA] source strain DSM-14801-/-SPH-1 comment type similarity text evidence 1 Belongs-to-the-UPF0502-family. comment evidence 2 type sequence-caution conflict type erroneous-initiation sequence id ABX38002 resource EMBL-CDS version 1 dbReference id CP000884 type EMBL property type protein-sequence-ID value ABX38002.1 property type status value ALT_INIT property type molecule-type value Genomic_DNA dbReference id WP_043783684.1 type RefSeq property type nucleotide-sequence-ID value NC_010002.1 dbReference id A9BNV7 type AlphaFoldDB dbReference id A9BNV7 type SMR dbReference id 398578.Daci_5373 type STRING dbReference id ABX38002 type EnsemblBacteria property type protein-sequence-ID value ABX38002 property type gene-ID value Daci_5373 dbReference id dac:Daci_5373 type KEGG dbReference id COG3132 type eggNOG property type taxonomic-scope value Bacteria dbReference id CLU_057831_0_0_4 type HOGENOM dbReference id UP000000784 type Proteomes property type component value Chromosome dbReference id 1.10.10.10 type Gene3D property type entry-name value Winged-helix-like-DNA-binding-domain-superfamily/Winged-helix-DNA-binding-domain property type match-status value 2 dbReference id MF_01584 type HAMAP property type entry-name value UPF0502 property type match-status value 1 dbReference id IPR007432 type InterPro property type entry-name value DUF480 dbReference id IPR036388 type InterPro property type entry-name value WH-like_DNA-bd_sf dbReference id IPR036390 type InterPro property type entry-name value WH_DNA-bd_sf dbReference id PTHR38768 type PANTHER property type entry-name value UPF0502-PROTEIN-YCEH property type match-status value 1 dbReference id PTHR38768:SF1 type PANTHER property type entry-name value UPF0502-PROTEIN-YCEH property type match-status value 1 dbReference id PF04337 type Pfam property type entry-name value DUF480 property type match-status value 1 dbReference id SSF46785 type SUPFAM property type entry-name value Winged-helix'-DNA-binding-domain property type match-status value 2 proteinExistence type inferred-from-homology keyword id KW-1185 Reference-proteome feature description UPF0502-protein-Daci_5373 id PRO_0000382556 type chain location begin position 1 end position 226 evidence key 1 type ECO:0000255 source dbReference id MF_01584 type HAMAP-Rule evidence key 2 type ECO:0000305 sequence checksum CDDF58402733D6D3 length 226 mass 24690 modified 2009-09-01 version 2 MPFDPRTTPLTAVEARVLATLMEKARTVPDSYPLTLNALVTGCNQKSSRDPVMEVSEGEAQEALDSLRLRTMSVQISSARATRWEHNFPRGVGVPDQSAVLLSLLMLRGPQTAGELRINSERWHRFADISSVEAFLEELRERSEEKGGPLVVLLPRAPGAREQRWAHLLCGPVDVNAMAQPPAAAGARGDALAQRVVDLEAQVQQLQARLAHVYAQLGLEEPGQSS 
