SMS_BP
Single Molecule Simulations -BP
|
Classes | |
class | SMS_BP.fbm_BP.FBM_BP |
Namespaces | |
namespace | SMS_BP |
namespace | SMS_BP.fbm_BP |
Functions | |
SMS_BP.fbm_BP.MCMC_state_selection (int initial_state_index, np.ndarray transition_matrix, np.ndarray possible_states, int n) | |
SMS_BP.fbm_BP._boundary_conditions (float fbm_store_last, float fbm_candidate, np.ndarray space_lim, str condition_type) | |
Variables | |
dict | SMS_BP.fbm_BP.BOUNDARY_CONDITIONS |
SMS_BP.fbm_BP.transition_matrix = np.array([[0.4, 0.6], [0.2, 0.8]]) | |
SMS_BP.fbm_BP.possible_states = np.array([1, 2]) | |
int | SMS_BP.fbm_BP.n = 50000 |
int | SMS_BP.fbm_BP.initial_state_index = 1 |
SMS_BP.fbm_BP.state_select | |
SMS_BP.fbm_BP.state_probability = np.zeros(len(possible_states)) | |
SMS_BP.fbm_BP.total_rate = np.sum(transition_matrix) | |
SMS_BP.fbm_BP.true_state_probability = np.sum(transition_matrix, axis=0)/total_rate | |
SMS_BP.fbm_BP.label | |
SMS_BP.fbm_BP.alpha | |
int | SMS_BP.fbm_BP.state_1_to_2 = np.zeros(n) - 1 |
int | SMS_BP.fbm_BP.state_2_to_1 = np.zeros(n) - 1 |