DAY-EC activated.
DAY-EC activated.
time=2026-05-30T16:27:40Z
squeue:
processes:
 608979   81703 Ss+     13:18:39  0.0  0.0 bash -il
 608998   81703 Ss+     13:18:39  0.0  0.0 bash -il
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1871708       1 S          08:52  0.0  0.0 sleep 900
1874376       1 S          03:54  0.0  0.0 sleep 900
1875799   81361 Ssl        01:13  0.0  0.0 /usr/libexec/xdg-desktop-portal
1876110       1 S          01:12  0.0  0.0 sleep 900
1878125 1878124 S          00:05  0.2  0.0 bash -l /tmp/daylily-ssm-me5mNk.sh
1878248 1878125 R          00:00  0.0  0.0 ps -u ubuntu -o pid,ppid,stat,etime,pcpu,pmem,cmd --sort=start_time
1878249 1878125 S          00:00  0.0  0.0 tail -80
direct status:
{
  "command": "bin/day_run produce_bclconvert_fastqs_and_metrics -p -j 20 -k --config run_context_file=config/runs.tsv bootstrap_bclconvert=true",
  "completed_at": "2026-05-30T16:26:32Z",
  "exit_code": 1,
  "repo_path": "/fsx/analysis_results/ubuntu/ccv20260530r42_illumina_bclconvert/daylily-omics-analysis",
  "session_name": "ccv20260530r42_bclconvert_rc0_direct",
  "started_at": "2026-05-30T16:26:18Z"
}

latest snakemake log:
Unlocking working directory.
