All modules for which code is available
- itasc.cellpose.cellpose_runner
- itasc.cellpose.divergence_maps
- itasc.cellpose.flow_following
- itasc.cellpose.joint
- itasc.cellpose.native_masks
- itasc.cellpose.retrack
- itasc.cellpose.shape
- itasc.cellpose.track_laptrack
- itasc.contact_analysis.catalog
- itasc.contact_analysis.config
- itasc.contact_analysis.contacts.batch
- itasc.contact_analysis.contacts.build
- itasc.contact_analysis.contacts.contact_labels
- itasc.contact_analysis.contacts.neighborhood
- itasc.contact_analysis.contacts.reader
- itasc.contact_analysis.contacts.signed_contact_length
- itasc.contact_analysis.curation
- itasc.contact_analysis.dynamics.collective
- itasc.contact_analysis.dynamics.kinematics
- itasc.contact_analysis.dynamics.msd
- itasc.contact_analysis.dynamics.store
- itasc.contact_analysis.dynamics.trajectories
- itasc.contact_analysis.frame_interval
- itasc.contact_analysis.pipeline
- itasc.contact_analysis.pixel_size
- itasc.contact_analysis.quantifier
- itasc.contact_analysis.quantifiers.cell_density
- itasc.contact_analysis.quantifiers.cell_dynamics
- itasc.contact_analysis.quantifiers.cell_shape
- itasc.contact_analysis.quantifiers.contacts
- itasc.contact_analysis.quantifiers.neighbor_count
- itasc.contact_analysis.quantifiers.nucleus_dynamics
- itasc.contact_analysis.quantifiers.nucleus_shape
- itasc.contact_analysis.quantifiers.shape_relational
- itasc.contact_analysis.quantifiers.signed_contact_length
- itasc.contact_analysis.records
- itasc.contact_analysis.shape.core
- itasc.contact_analysis.shape.relational
- itasc.contact_analysis.shape_tables
- itasc.core.cancellation
- itasc.core.commit
- itasc.core.imageops
- itasc.core.label_store
- itasc.core.lineage
- itasc.core.logging
- itasc.core.paths
- itasc.core.tiff
- itasc.correction.labels
- itasc.segmentation.cell_divergence_segmentation
- itasc.segmentation.cell_label_icm
- itasc.segmentation.contour_filtering
- itasc.tracking_ultrack.atoms
- itasc.tracking_ultrack.config
- itasc.tracking_ultrack.corrections
- itasc.tracking_ultrack.db_build
- itasc.tracking_ultrack.db_query
- itasc.tracking_ultrack.export
- itasc.tracking_ultrack.extend
- itasc.tracking_ultrack.linking
- itasc.tracking_ultrack.multi_threshold
- itasc.tracking_ultrack.reseed
- itasc.tracking_ultrack.retracker
- itasc.tracking_ultrack.scoring
- itasc.tracking_ultrack.seed_prior
- itasc.tracking_ultrack.solve
- itasc.tracking_ultrack.swap_candidate
- itasc.tracking_ultrack.track_quality
- itasc.tracking_ultrack.validation_nodes
- itasc.tracking_ultrack.validation_state