torch<3.0.0,>=2.7.0
muon<0.2.0,>=0.1.7
scipy<2.0.0,>=1.15.3
tqdm<5.0.0,>=4.67.1
h5py<4.0.0,>=3.13.0
seaborn<1.0.0,>=0.13.2
glasbey<1.0.0,>=0.2.1
matplotlib<4.0.0,>=3.10.1
ipywidgets<9.0.0,>=8.1.7
ipykernel<7.0.0,>=6.29.5
jupyter<2.0.0,>=1.1.1
gseapy<4.0.0,>=1.1.8
mygene<4.0.0,>=3.2.2

[docs]
sphinx>=8.2
sphinx-rtd-theme>=1.0
myst-parser>=0.21
jupyter-sphinx>=0.3
