{##} {##} {{ title }} {% set utils = imp0rt('mrQA.utils') %}

Summary of non-compliance:

List of non-compliant modalities - {{ dataset.non_compliant_modality_names|length }}

{# #} {# #} {% for modality in dataset.modalities|sort %} {% if not modality.compliant %} {% if modality.subjects|length > 2 %} {% set percent_non_compliant = 100 * modality.non_compliant_subject_names|length|float / modality.subjects|length|float %} {% set percent_compliant = 100 * modality.compliant_subject_names|length|float / modality.subjects|length|float %} {# #} {# #} {% endif %} {% endif %} {% endfor %}

Modality	# non-compliant (%)	Non-compliant subjects			Parameters	# compliant (%)	# subjects	# Echo-Times	errors
{{ modality.name }}	{{ modality.non_compliant_subject_names\|length }} ({{ percent_non_compliant\|round(2, 'floor') }} %)	{% if modality.non_compliant_subject_names\|length < 50 %} {% for name in modality.non_compliant_subject_names\|sort %} {{ name }}, {% endfor %} {% else %} Too many to fit here. Click here for full list. {% endif %}			{% for parameter in modality.non_compliant_params()\|sort %} {{ parameter }}, {% endfor %}	{{ modality.compliant_subject_names\|length }} ( {{ percent_compliant\|round(2, 'floor') }} %)	{{ modality.subjects\|length }}	#} {# {{ modality.get_echo_times() \| length }}#} {#	#} {# {{ mode.error_children\|length }}#} {#

List of fully compliant modalities : {{ dataset.compliant_modality_names | length }}

{% set cols = 4 %} {% set rows = (dataset.compliant_modality_names|length // cols) + 1 %} {% for i in range(rows) %} {% for j in range(cols) %} {% set index = i * cols + j %} {% if index < dataset.compliant_modality_names|length %} {% endif %} {% endfor %} {% endfor %}

{% for modality in dataset.modalities|sort %} {% if not modality.compliant %} {% if modality.get_echo_times() %}

Modality : {{ modality.name }}

{% endif %} {% for echo_time in modality.get_echo_times()|sort %} {% set te = echo_time %} {% set reference = modality.get_reference(echo_time) %} {% set runs_by_echo = utils._get_runs_by_echo(modality, 3) %}

Reference {{ loop.index }} | Number of Runs : {{ runs_by_echo[te]|length }}

{% for key in reference.keys()|sort %} {% endfor %} {% for key in reference.keys()|sort %} {% endfor %}

{{ key }}
{{ reference[key] }}

{% if modality.non_compliant_params(te).any() %} {% endif %} {% for parameter in modality.non_compliant_params(te)|sort %} {# {% set reasons = modality.query_by_param(parameter, te) %}#} {% endfor %}

Parameter				Ref. Value				Found				Subject_Session
{{ parameter }}				{% for value in modality.query_by_param(parameter, te, 'ref_value') %} {{ value }}, {% endfor %}				{% for value in modality.query_by_param(parameter, te, 'new_value') %} {{ value }}, {% endfor %}				{% for subject in modality.query_by_param(parameter, te, 'subjects') %} {{ subject }}, {% endfor %}

{% endfor %} {% if modality.error_subject_names() %}

Error				Subject_Session
Could not compute non-compliance				{% for entry in modality.error_subject_names() %} {{ entry }}, {% endfor %}

{% endif %} {% endif %} {% endfor %} {% for modality in dataset.modalities|sort %} {% if modality.compliant %}

Modality : {{ modality.name }}

{% if not modality.get_echo_times() %}

Warning : Could not compute reference

Reference {{ loop.index }} | Number of Runs : {{ runs_by_echo[te]|length }}

{# {% else %}#} {#

Reference

#} {# {% endif %}#} {% for key in reference.keys()|sort %} {% endfor %} {% for key in reference.keys()|sort %} {% endfor %}

{{ key }}
{{ reference[key] }}

{% endfor %} {% if modality.error_subject_names() %}

Error				Subject_Session
Could not compute non-compliance				{% for entry in modality.error_subject_names() %} {{ entry }}, {% endfor %}

{% endif %} {% endif %} {% endfor %}