LICENSE
README.md
pyproject.toml
src/echosv/__init__.py
src/echosv/bed_utils.py
src/echosv/collect_suppread_lrs.py
src/echosv/collect_suppread_srs.py
src/echosv/generate_chain.py
src/echosv/genotype.py
src/echosv/main.py
src/echosv/match.py
src/echosv/sv_cmp_liftover.py
src/echosv/sv_cmp_mbm.py
src/echosv/sv_merge.py
src/echosv/vcf_utils.py
src/echosv.egg-info/PKG-INFO
src/echosv.egg-info/SOURCES.txt
src/echosv.egg-info/dependency_links.txt
src/echosv.egg-info/entry_points.txt
src/echosv.egg-info/requires.txt
src/echosv.egg-info/top_level.txt
src/echosv/beds/colo829bl_hap1_Ns.bed
src/echosv/beds/colo829bl_hap2_Ns.bed
src/echosv/beds/h1437bl_hap1_Ns.bed
src/echosv/beds/h1437bl_hap2_Ns.bed
src/echosv/beds/h2009bl_hap1_Ns.bed
src/echosv/beds/h2009bl_hap2_Ns.bed
src/echosv/beds/hcc1937bl_hap1_Ns.bed
src/echosv/beds/hcc1937bl_hap2_Ns.bed
src/echosv/beds/hcc1954bl_hap1_Ns.bed
src/echosv/beds/hcc1954bl_hap2_Ns.bed
src/echosv/beds/hg008bl_hap1_Ns.bed
src/echosv/beds/hg008bl_hap2_Ns.bed
src/echosv/beds/hg38_no_alt_Ns.bed