{% extends "sphinx_rtd_theme/footer.html" %}

{#
  The design of the rtd-theme footer template includes content which is
  not inside a block (and thus not trivial to overwrite). By setting
  the following variabels we essentially hide footer content which we want
  to include ourselves. P.S. These variables are only used in the footer.
#}
{% set show_sphinx = false %}
{% set show_copyright = false %}

{#
  Footer design largely replicates https://github.com/nextstrain/nextstrain.org/blob/b1e09e57e91ed0c9343e1cd3104877ec3c5344a4/static-site/src/components/Footer/index.jsx
#}

{#
  The following could probably be written in a much nicer, less verbose style.
  This is/was my first time using Jinja, so i'm falling back onto basic HTML.
  If you can improve this, please do & show me the way!       james oct 2020
#}
{% block extrafooter %}

  <div class="citation">
    Hadfield <i>et al.,</i>
    <a href="https://doi.org/10.1093/bioinformatics/bty407" target="_blank" rel="noreferrer noopener">Nextstrain: real-time tracking of pathogen evolution</a>
    <i>, Bioinformatics</i> (2018)
  </def>


  <p class="avatar">Nextstrain is built by</p>
  <div class="avatar">

    <span>
      <a href="http://bedford.io/team/trevor-bedford/">
        <img src="{{ pathto('_static/team/trevor-bedford.jpg' + logo, 1) }}" width="32"/>
        Trevor Bedford
      </a>
    </span>
    ,
    <span>
      <a href="https://neherlab.org/richard-neher.html">
        <img src="{{ pathto('_static/team/richard-neher.jpg"' + logo, 1) }}" width="32"/>
        Richard Neher
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/james-hadfield/">
        <img src="{{ pathto('_static/team/james-hadfield.jpg' + logo, 1) }}" width="32"/>
        James Hadfield
      </a>
    </span>
    ,
    <span>
      <a href="http://emmahodcroft.com/">
        <img src="{{ pathto('_static/team/emma-hodcroft.jpg' + logo, 1) }}" width="32"/>
        Emma Hodcroft
      </a>
    </span>
    ,
    <span>
      <a href="https://bedford.io/team/thomas-sibley/">
        <img src="{{ pathto('_static/team/thomas-sibley.jpg' + logo, 1) }}" width="32"/>
        Thomas Sibley
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/john-huddleston/">
        <img src="{{ pathto('_static/team/john-huddleston.jpg' + logo, 1) }}" width="32"/>
        John Huddleston
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/jover-lee/">
        <img src="{{ pathto('_static/team/jover-lee.jpg' + logo, 1) }}" width="32"/>
        Jover Lee
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/kairsten-fay/">
        <img src="{{ pathto('_static/team/kairsten-fay.jpg' + logo, 1) }}" width="32"/>
        Kairsten Fay
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/sidney-bell/">
        <img src="{{ pathto('_static/team/sidney-bell.jpg' + logo, 1) }}" width="32"/>
        Sidney Bell
      </a>
    </span>
    ,
    <span>
      <a href="http://www.colinmegill.com/">
        <img src="{{ pathto('_static/team/colin-megill.jpg' + logo, 1) }}" width="32"/>
        Colin Megill
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/barney-potter/">
        <img src="{{ pathto('_static/team/barney-potter.jpg' + logo, 1) }}" width="32"/>
        Barney Potter
      </a>
    </span>
    ,
    <span>
      <a href="https://neherlab.org/pavel-sagulenko.html">
        <img src="{{ pathto('_static/team/pavel-sagulenko.jpg' + logo, 1) }}" width="32"/>
        Pavel Sagulenko
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/charlton-callender/">
        <img src="{{ pathto('_static/team/charlton-callender.jpg' + logo, 1) }}" width="32"/>
        Charlton Callender
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/misja-ilcisin/">
        <img src="{{ pathto('_static/team/misja-ilcisin.jpg' + logo, 1) }}" width="32"/>
        Misja Ilcisin
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/louise-moncla/">
        <img src="{{ pathto('_static/team/louise-moncla.jpg' + logo, 1) }}" width="32"/>
        Louise Moncla
      </a>
    </span>
    ,
    <span>
      <a href="http://bedford.io/team/allison-black/">
        <img src="{{ pathto('_static/team/allison-black.jpg' + logo, 1) }}" width="32"/>
        Allison Black
      </a>
    </span>
    ,
    <span>
      <a href="http://grubaughlab.com/team/anderson-brito/">
        <img src="{{ pathto('_static/team/anderson-brito.jpg' + logo, 1) }}" width="32"/>
        Anderson Brito
      </a>
    </span>
    ,
    <span>
      <a href="http://grubaughlab.com/team/nathan-grubaugh/">
        <img src="{{ pathto('_static/team/nate-grubaugh.jpg' + logo, 1) }}" width="32"/>
        Nate Grubaugh
      </a>
    </span>
  </div>


  <div class="footer-small-text">
    All <a href="https://github.com/nextstrain">source code</a> is freely available under the terms of the <a href="https://github.com/nextstrain/auspice/blob/master/LICENSE.txt">GNU Affero General Public License</a>. Screenshots may be used under a <a href="https://creativecommons.org/licenses/by/4.0/">CC-BY-4.0 license</a> and attribution to nextstrain.org must be provided.
  </div>

  <div class="footer-small-text">
    This work is made possible by the open sharing of genetic data by research groups from all over the world.
    We gratefully acknowledge their contributions.
    Special thanks to Kristian Andersen, David Blazes, Peter Bogner, Matt Cotten, Ana Crisan, Gytis Dudas, Vivien Dugan, Karl Erlandson, Nuno Faria, Jennifer Gardy, Becky Kondor, Dylan George, Ian Goodfellow, Betz Halloran, Christian Happi, Jeff Joy, Paul Kellam, Philippe Lemey, Nick Loman, Sebastian Maurer-Stroh, Oliver Pybus, Andrew Rambaut, Colin Russell, Pardis Sabeti, Katherine Siddle, Kristof Theys, Dave Wentworth, Shirlee Wohl and Nathan Yozwiak for comments, suggestions and data sharing.
  </div>

  <hr/>

  <div class="logo">
    <a class="logo" href="http://www.fredhutch.org/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:90px; max-width:90px;" src="{{ pathto('_static/logos/fred-hutch-logo-small.png' + logo, 1) }}" />
    </a>
    <a class="logo" href="http://www.eb.tuebingen.mpg.de/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:90px; max-width:90px;" src="{{ pathto('_static/logos/max-planck-logo.png' + logo, 1) }}"/>
    </a>
    <a class="logo" href="https://www.nih.gov/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:65px; max-width:65px;" src="{{ pathto('_static/logos/nih-logo.jpg' + logo, 1) }}"/>
    </a>
    <a class="logo" href="https://www.mapbox.com" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:115px; max-width:115px;" src="{{ pathto('_static/logos/mapbox-logo-black.svg' + logo, 1) }}"/>
    </a>
    <a class="logo" href="https://erc.europa.eu/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:70px; max-width:70px;" src="{{ pathto('_static/logos/erc-logo.jpg' + logo, 1) }}"/>
    </a>
    <a class="logo" href="https://www.openscienceprize.org/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:110px; max-width:110px;" src="{{ pathto('_static/logos/osp-logo-small.png' + logo, 1) }}"/>
    </a>
    <a class="logo" href="http://biozentrum.org/" target="_blank" rel="noopener noreferrer">
      <span class="logo"></span>
      <img alt="logo" style="width:115px; max-width:115px;" src="{{ pathto('_static/logos/bz_logo.png' + logo, 1) }}"/>
    </a>
  </div>

  <div class="copyright">
    &copy; {% trans %}Copyright{% endtrans %} {{ copyright }}
  </div>

  <div class="copyright">
    {%- if build_id and build_url %}
      Build <a href="{{ build_url }}">{{ build_id }}</a>.
    {%- elif commit %}
      Revision <code>{{ commit }}</code>.
    {%- endif %}
    {%- if last_updated %}
      Last updated on {{ last_updated }}.
    {%- endif %}
    </p>
    Built with <a href="https://www.sphinx-doc.org/">Sphinx</a>
    using a <a href="https://github.com/nextstrain/sphinx-theme">customised</a>
    <a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a> provided by
    <a href="https://readthedocs.org">Read the Docs</a>.
  </div>

{% endblock %}