AGENTS.md
CHANGELOG.md
CONTRIBUTING.md
MANIFEST.in
README.md
pyproject.toml
run.py
setup.py
docs/algorithm.md
docs/architecture.md
docs/gui.md
docs/installation.md
docs/npy_manifest_guide.md
docs/reproducibility.md
docs/roadmap.md
docs/images/image.png
src/recip_slice/__init__.py
src/recip_slice/__main__.py
src/recip_slice/_version.py
src/recip_slice/cli.py
src/recip_slice/style.qss
src/recip_slice.egg-info/PKG-INFO
src/recip_slice.egg-info/SOURCES.txt
src/recip_slice.egg-info/dependency_links.txt
src/recip_slice.egg-info/entry_points.txt
src/recip_slice.egg-info/requires.txt
src/recip_slice.egg-info/top_level.txt
src/recip_slice/assets/chevron-down-disabled.svg
src/recip_slice/assets/chevron-down.svg
src/recip_slice/assets/chevron-up-disabled.svg
src/recip_slice/assets/chevron-up.svg
src/recip_slice/compat/__init__.py
src/recip_slice/compat/aliases.py
src/recip_slice/compat/dataset_discovery.py
src/recip_slice/compat/qt_slice_gui.py
src/recip_slice/compat/slice_viewer.py
src/recip_slice/compat/virtual_precession.py
src/recip_slice/core/__init__.py
src/recip_slice/core/calibration.py
src/recip_slice/core/common.py
src/recip_slice/core/dataset.py
src/recip_slice/core/frame_preview.py
src/recip_slice/core/geometry.py
src/recip_slice/core/job_queue.py
src/recip_slice/core/options.py
src/recip_slice/core/preflight.py
src/recip_slice/core/project.py
src/recip_slice/core/result_management.py
src/recip_slice/core/settings.py
src/recip_slice/core/validation.py
src/recip_slice/core/workflow.py
src/recip_slice/gui/__init__.py
src/recip_slice/gui/canvas.py
src/recip_slice/gui/helpers.py
src/recip_slice/gui/viewer.py
src/recip_slice/gui/window.py
src/recip_slice/gui/window_comparison.py
src/recip_slice/gui/window_dataset.py
src/recip_slice/gui/window_dependencies.py
src/recip_slice/gui/window_display.py
src/recip_slice/gui/window_interaction.py
src/recip_slice/gui/window_layout.py
src/recip_slice/gui/window_measurement.py
src/recip_slice/gui/window_process.py
src/recip_slice/gui/window_queue.py
src/recip_slice/gui/window_state.py
src/recip_slice/gui/window_widgets.py
src/recip_slice/reconstruction/__init__.py
src/recip_slice/reconstruction/_accum_ext.c
src/recip_slice/reconstruction/_accum_ext.pyx
src/recip_slice/reconstruction/comparison.py
src/recip_slice/reconstruction/legacy.py
src/recip_slice/reconstruction/legacy_planes.py
src/recip_slice/reconstruction/legacy_volume.py
src/recip_slice/reconstruction/legacy_workflows.py
src/recip_slice/reconstruction/measurements.py
src/recip_slice/reconstruction/physical.py
src/recip_slice/reconstruction/physical_background.py
src/recip_slice/reconstruction/physical_io.py
src/recip_slice/reconstruction/physical_native.py
src/recip_slice/reconstruction/physical_pipeline.py
src/recip_slice/reconstruction/physical_sampling.py
src/recip_slice/reconstruction/physical_tasks.py
src/recip_slice/reconstruction/results.py
tests/test_calibration.py
tests/test_cli.py
tests/test_comparison.py
tests/test_coverage_semantics.py
tests/test_custom_planes.py
tests/test_dataset.py
tests/test_frame_preview.py
tests/test_gui_optional.py
tests/test_job_queue.py
tests/test_measurements.py
tests/test_packaging.py
tests/test_preflight.py
tests/test_project.py
tests/test_project_cycle.py
tests/test_reconstruction.py
tests/test_result_management.py
tests/test_results.py
tests/test_settings.py
tests/test_spot_validation.py
tests/test_workflow.py
tests/test_xds_plan.py
tools/project_cycle.py