appdirs==1.4.4
attrs==25.3.0
biopython==1.85
configargparse==1.7
datrie==0.8.2
docopt==0.6.2
docutils==0.21.2
gitdb==4.0.12
gitpython==3.1.44
jsonschema==4.23.0
nbformat==5.10.4
numpy==2.2.5
psutil==7.0.0
pyyaml==6.0.2
smmap==5.0.2
snakemake==9.3.3
toposort==1.10
traitlets==5.14.3
wrapt==1.17.2
zipp==3.21.0
rich==14.0.0
