LICENSE
README.md
pyproject.toml
tests/test_agents_md.py
tests/test_arxiv_fetcher.py
tests/test_arxiv_parser.py
tests/test_cli.py
tests/test_dedup_ranking.py
tests/test_exporters.py
tests/test_https_only_transport.py
tests/test_i18n.py
tests/test_identifiers.py
tests/test_intelligence.py
tests/test_mcp_tools.py
tests/test_models.py
tests/test_oa_resolver.py
tests/test_path_safety.py
tests/test_pdf_download.py
tests/test_pdf_metadata.py
tests/test_pipeline.py
tests/test_pptx_edit.py
tests/test_query.py
tests/test_rate_limit.py
tests/test_top_venues.py
tests/test_webrunner_pdf.py
thesisagents/__init__.py
thesisagents/__main__.py
thesisagents/cli.py
thesisagents.egg-info/PKG-INFO
thesisagents.egg-info/SOURCES.txt
thesisagents.egg-info/dependency_links.txt
thesisagents.egg-info/entry_points.txt
thesisagents.egg-info/requires.txt
thesisagents.egg-info/top_level.txt
thesisagents/core/__init__.py
thesisagents/core/constants.py
thesisagents/core/dedup.py
thesisagents/core/exceptions.py
thesisagents/core/identifiers.py
thesisagents/core/models.py
thesisagents/core/oa_resolver.py
thesisagents/core/pdf_cookies.py
thesisagents/core/pdf_download.py
thesisagents/core/pipeline.py
thesisagents/core/query.py
thesisagents/core/ranking.py
thesisagents/core/top_venues.py
thesisagents/exporters/__init__.py
thesisagents/exporters/base.py
thesisagents/exporters/bibtex.py
thesisagents/exporters/csljson.py
thesisagents/exporters/csv_export.py
thesisagents/exporters/i18n.py
thesisagents/exporters/json_export.py
thesisagents/exporters/markdown.py
thesisagents/exporters/pptx.py
thesisagents/exporters/pptx_edit.py
thesisagents/exporters/ris.py
thesisagents/exporters/xlsx.py
thesisagents/fetchers/__init__.py
thesisagents/fetchers/base.py
thesisagents/fetchers/http.py
thesisagents/fetchers/rate_limit.py
thesisagents/fetchers/webrunner_browser.py
thesisagents/fetchers/webrunner_pdf.py
thesisagents/gui/__init__.py
thesisagents/gui/app.py
thesisagents/gui/i18n.py
thesisagents/gui/main_window.py
thesisagents/gui/workers.py
thesisagents/gui/models/__init__.py
thesisagents/gui/models/papers_table_model.py
thesisagents/gui/pages/__init__.py
thesisagents/gui/pages/deck.py
thesisagents/gui/pages/enrich.py
thesisagents/gui/pages/placeholder.py
thesisagents/gui/pages/search.py
thesisagents/gui/pages/settings.py
thesisagents/gui/widgets/__init__.py
thesisagents/gui/widgets/source_multiselect.py
thesisagents/intelligence/__init__.py
thesisagents/intelligence/pdf.py
thesisagents/intelligence/pdf_assets.py
thesisagents/intelligence/pdf_metadata.py
thesisagents/intelligence/summarise.py
thesisagents/mcp/__init__.py
thesisagents/mcp/__main__.py
thesisagents/mcp/server.py
thesisagents/sources/__init__.py
thesisagents/sources/acm/__init__.py
thesisagents/sources/acm/fetcher.py
thesisagents/sources/acm/parser.py
thesisagents/sources/arxiv/__init__.py
thesisagents/sources/arxiv/fetcher.py
thesisagents/sources/arxiv/parser.py
thesisagents/sources/core/__init__.py
thesisagents/sources/core/fetcher.py
thesisagents/sources/core/parser.py
thesisagents/sources/crossref/__init__.py
thesisagents/sources/crossref/fetcher.py
thesisagents/sources/crossref/parser.py
thesisagents/sources/dblp/__init__.py
thesisagents/sources/dblp/fetcher.py
thesisagents/sources/dblp/parser.py
thesisagents/sources/doaj/__init__.py
thesisagents/sources/doaj/fetcher.py
thesisagents/sources/doaj/parser.py
thesisagents/sources/europepmc/__init__.py
thesisagents/sources/europepmc/fetcher.py
thesisagents/sources/europepmc/parser.py
thesisagents/sources/hal/__init__.py
thesisagents/sources/hal/fetcher.py
thesisagents/sources/hal/parser.py
thesisagents/sources/ieee/__init__.py
thesisagents/sources/ieee/fetcher.py
thesisagents/sources/ieee/parser.py
thesisagents/sources/ieee/webrunner_backend.py
thesisagents/sources/openaire/__init__.py
thesisagents/sources/openaire/fetcher.py
thesisagents/sources/openaire/parser.py
thesisagents/sources/openalex/__init__.py
thesisagents/sources/openalex/fetcher.py
thesisagents/sources/openalex/parser.py
thesisagents/sources/pubmed/__init__.py
thesisagents/sources/pubmed/fetcher.py
thesisagents/sources/pubmed/parser.py
thesisagents/sources/scholar/__init__.py
thesisagents/sources/scholar/fetcher.py
thesisagents/sources/scholar/parser.py
thesisagents/sources/scholar/webrunner_backend.py
thesisagents/sources/semantic_scholar/__init__.py
thesisagents/sources/semantic_scholar/fetcher.py
thesisagents/sources/semantic_scholar/parser.py
thesisagents/sources/springer/__init__.py
thesisagents/sources/springer/fetcher.py
thesisagents/sources/springer/parser.py
thesisagents/utils/__init__.py
thesisagents/utils/logging.py
thesisagents/utils/path_safety.py