{% from "bootstrap.html" import css, custom_css %}
Prov | Beställt | Familj | Kön | Status | Vävnad | Ticket | Applikation | Bioinformatisk Analys |
---|---|---|---|---|---|---|---|---|
{{ sample.name }}* ({{ sample.internal_id }}) | {{ sample.ordered_at }} | {{ case }}* | {{ sample.sex }}* ( analys: {% if sample.sex != sample.analysis_sex %} {{ sample.analysis_sex }} {% else %} {{ sample.analysis_sex }} {% endif %}) | {{ sample.status }}* | {{ sample.source }}* | {{ sample.ticket }} | {{ sample.application }}* | {{ sample.data_analysis }}* |
Prov | Ankom | Biblioteksberedning | Beredd | Bait Set | Sekvensering | Sekvenserad | Bioinformatisk Analys | Svarsdatum |
---|---|---|---|---|---|---|---|---|
{{ sample.name }}* | {{ sample.received_at }} | {{ sample.prep_method }} | {{ sample.prepared_at }} | {{ sample.capture_kit }} | {{ sample.sequencing_method }} | {{ sample.sequenced_at }} | {{ pipeline }} | {{ sample.delivered_at }} {% if sample.processing_time != 'N/A' %} ({{ sample.processing_time }} dagar) {% endif %} |
Familj | MIP-version | Genpaneler | Genomversion |
---|---|---|---|
{{ case }}* | {{ pipeline_version }} | {{ panels }} | {{ genome_build }} |
Prov | Läspar [M] | Mappade sekvenser [%] | Medelsekvensdjup | Täckningsgrad 10x [%] | Duplikat [%] |
---|---|---|---|---|---|
{{ sample.name }}* | {{ sample.million_read_pairs }} | {{ sample.mapped_reads }} | {{ sample.target_coverage }} | {{ sample.target_completeness }} | {{ sample.duplicates }} |
Varianter finns uppladdade i Scout: scout.scilifelab.se/{{ customer_internal_id }}/{{ case }}
{% endif %} {% for application in applications %}{{ application.description }}
{% if application.limitations %}{{ application.limitations }}
{% endif %}
Valtteri Wirta
Head of unit, Clinical Genomics