LICENSE
README.md
pyproject.toml
src/nanoplm/__init__.py
src/nanoplm.egg-info/PKG-INFO
src/nanoplm.egg-info/SOURCES.txt
src/nanoplm.egg-info/dependency_links.txt
src/nanoplm.egg-info/entry_points.txt
src/nanoplm.egg-info/requires.txt
src/nanoplm.egg-info/top_level.txt
src/nanoplm/cli/__init__.py
src/nanoplm/cli/data.py
src/nanoplm/cli/distill.py
src/nanoplm/cli/pretrain.py
src/nanoplm/config/__init__.py
src/nanoplm/config/datasets.py
src/nanoplm/data/__init__.py
src/nanoplm/data/dataset.py
src/nanoplm/data/downloader.py
src/nanoplm/data/extractor.py
src/nanoplm/data/filterer.py
src/nanoplm/data/shuffler.py
src/nanoplm/data/splitor.py
src/nanoplm/distillation/__init__.py
src/nanoplm/distillation/collator.py
src/nanoplm/distillation/pipeline.py
src/nanoplm/distillation/pipeline_builder.py
src/nanoplm/distillation/session_manager.py
src/nanoplm/distillation/trainer.py
src/nanoplm/models/__init__.py
src/nanoplm/models/student/__init__.py
src/nanoplm/models/student/feature_embedding.py
src/nanoplm/models/student/model.py
src/nanoplm/models/student/pca.csv
src/nanoplm/models/student/tokenizer.py
src/nanoplm/models/teacher/__init__.py
src/nanoplm/models/teacher/base.py
src/nanoplm/models/teacher/prott5.py
src/nanoplm/pretraining/__init__.py
src/nanoplm/pretraining/collator.py
src/nanoplm/pretraining/dataset.py
src/nanoplm/pretraining/pipeline.py
src/nanoplm/pretraining/models/__init__.py
src/nanoplm/pretraining/models/modern_bert/__init__.py
src/nanoplm/pretraining/models/modern_bert/model.py
src/nanoplm/pretraining/models/modern_bert/tokenizer.py
src/nanoplm/utils/__init__.py
src/nanoplm/utils/common.py
src/nanoplm/utils/logger.py
tests/test_data_collator.py
tests/test_fasta_dataset.py
tests/test_integration.py
tests/test_pretraining_collator.py
tests/test_runner.py
tests/test_smoke.py