{% extends "scitex_sdk/app/app_shell.html" %}
{% load static i18n scitex_i18n scitex_panes scitex_static scitex_project_picker %}
{% comment %}
Host chrome comes from scitex_sdk/app/app_shell.html: the hub maps it to its own
base page (site header + dock), standalone uses the SDK UI shell.
{% endcomment %}
{% block extra_css %}
    <meta name="stx-mount" content="{{ stx_mount }}">
    <meta name="csrf-token" content="{{ csrf_token }}">
    {% scitex_project_provider_meta %}
    <link rel="stylesheet" href="{% app_static 'scitex_sdk/ui/css/app/form-controls.css' %}">
    <link rel="stylesheet" href="{% app_static 'scitex_sdk/ui/css/app/app-header.css' %}">
    <link rel="stylesheet" href="{% app_static 'stats/css/stats.css' %}">
    <link rel="stylesheet" href="{% app_static 'stats/css/recommend.css' %}">
    <link rel="stylesheet" href="{% app_static 'stats/css/report.css' %}">
{% endblock %}

{% block scitex_app_content %}
<div class="stats-app" data-stats-app>
  {% comment %}
  Canonical SDK AppHeader (scitex-sdk ui, latest): the component renders the
  row — title span (never an h1: a mounted leaf must not add a second H1, and
  the h1 UA margin is what made this title differ from sibling apps),
  version badge from mount metadata, project slot, actions — from the mount
  root below. The leaf owns only identity: the product name, its package
  version, and its project picker element, which leaf JS moves into the
  canonical slot after the prebuilt module mounts (see extra_js + app.js).
  {% endcomment %}
  <div data-stx-app-header
       data-app-title="SciTeX Stats"
       data-app-version="{{ stats_version }}"
       data-stats-project="{{ stats_current_project_id }}"
       data-stats-header>
    {% scitex_project_picker scope="project" current=stats_current_project_id %}
  </div>
{% translate "1. Data Input" as label_data %}{% translate "2. Test Selection" as label_test %}{% translate "3. Results" as label_results %}
{% scitex_panes "stats" columns="minmax(0,1.1fr) minmax(0,0.9fr) minmax(0,1.2fr)" active="data" %}
  {% scitex_pane "data" label=label_data order=1 css_class="stats-pane" %}
    <header class="stats-pane__header" data-stx-pane-header>
      <h2 class="stats-pane__title">{% translate "1. Data Input" %}</h2>
    </header>
    <h2 class="stats-visually-hidden">{% translate "1. Data Input" %}</h2>
    <input type="file" id="statsCsv" accept=".csv,.tsv,.txt,text/csv" hidden>
    <div class="stats-pane__body stats-dropzone" id="statsDataDrop">
      {% comment %}
      PROJECT-DEFAULT MODE. The active project's authorized CSV/TSV files come
      from the provider-backed endpoint, server-rendered here; Quick analysis
      (below) is the explicit stateless alternative.
      {% endcomment %}
      <section class="stats-project" id="statsProjectFiles" data-stats-project-panel{% if not stats_current_project_id %} hidden{% endif %}>
        <h3 class="stats-project__title">{% translate "Project data" %}</h3>
        <ul class="stats-project__list" data-stats-project="{{ stats_current_project_id }}">
          {% for f in project_files %}
          <li class="stats-project__file">
            <button type="button" class="stats-btn stats-btn--ghost stats-project__import" data-file="{{ f.name }}">{{ f.name }}</button>
            <span class="stats-project__meta">{{ f.size }} B</span>
          </li>
          {% empty %}
          <li class="stats-project__empty stats-hint">{% translate "No CSV or TSV files in this project yet." %}</li>
          {% endfor %}
        </ul>
      </section>
      <section class="stats-manual" id="statsManualData" data-stats-manual>
        <p class="stats-hint">{% translate "One group per box. Paste numbers separated by spaces, commas or new lines." %}</p>
        <button type="button" class="stats-btn stats-dropzone__button" id="statsChooseFile">{% translate "Drop a CSV or TSV file here, or choose a file" %}</button>
        <label class="stats-field stats-sep"><span>{% translate "Separator" %}</span>
          <select class="stx-select" id="statsSep">
            <option value="auto" selected>{% translate "Auto" %}</option>
            <option value=",">{% translate "Comma" %}</option>
            <option value="&#9;">{% translate "Tab" %}</option>
            <option value=";">{% translate "Semicolon" %}</option>
            <option value="|">{% translate "Pipe" %}</option>
          </select>
        </label>
        <section class="stats-source" aria-labelledby="statsSourceTitle" hidden>
          <h3 class="stats-source__title" id="statsSourceTitle">{% translate "No dataset yet?" %}</h3>
          <button type="button" class="stats-btn stats-btn--secondary stats-source__sample" id="statsSampleOld" tabindex="-1" aria-hidden="true" hidden>{% translate "Try with Sample Data" %}</button>
          <p class="stats-hint" id="statsSampleHint">{% translate "Use the Try with Sample Data button at the right of the row below." %}</p>
        </section>
      </section>
      <div class="stats-options">
        <label class="stats-field"><span>{% translate "Design" %}</span>
          <select class="stx-select" id="statsDesign">
            <option value="independent" selected>{% translate "Independent groups" %}</option>
            <option value="paired">{% translate "Paired / repeated measures" %}</option>
          </select>
        </label>
        <label class="stats-field"><span>{% translate "Measurement scale" %}</span>
          <select class="stx-select" id="statsScale">
            <option value="continuous" selected>{% translate "Continuous" %}</option>
            <option value="ordinal">{% translate "Ordinal" %}</option>
            <option value="categorical">{% translate "Categorical (one row of counts per box)" %}</option>
          </select>
        </label>
      </div>
      <div id="statsGroups" class="stats-groups"></div>
      <section class="stats-colpick" id="statsColPick" hidden>
        <h3 class="stats-source__title">{% translate "Choose columns to import" %}</h3>
        <div class="stats-colpick__list" id="statsColPickList" role="group" aria-label="{% translate "CSV columns" %}"></div>
        <div class="stats-row">
          <button type="button" class="stats-btn stats-btn--secondary" id="statsColPickImport">{% translate "Import selected" %}</button>
          <button type="button" class="stats-btn stats-btn--ghost" id="statsColPickCancel">{% translate "Cancel" %}</button>
        </div>
      </section>
      <div class="stats-row">
        <button type="button" class="stats-btn stats-btn--ghost" id="statsAddGroup">+ {% translate "Add group" %}</button>
        <button type="button" class="stats-btn stats-btn--ghost" id="statsClear">{% translate "Clear" %}</button>
        <button type="button" class="stats-btn stats-btn--secondary stats-source__sample stats-row__right" id="statsSample" title="{% translate "Loads sample data fitting the current design and scale into the boxes, replacing anything already entered." %}">{% translate "Try with Sample Data" %}</button>
      </div>
    </div>
  {% endscitex_pane %}

  {% scitex_pane "test" label=label_test order=2 css_class="stats-pane" %}
    <header class="stats-pane__header" data-stx-pane-header>
      <h2 class="stats-pane__title">{% translate "2. Test Selection" %}</h2>
    </header>
    <div class="stats-pane__body">
      <p id="statsError" class="stats-error" role="alert" hidden></p>
      <div class="stats-options">
        <label class="stats-field stats-field--alt"><span>{% translate "Alternative hypothesis" %}</span>
          <select class="stx-select" id="statsAlt">
            <option value="two-sided" selected>{% translate "two-sided" %}</option>
            <option value="greater">{% translate "greater" %}</option>
            <option value="less">{% translate "less" %}</option>
          </select>
        </label>
      </div>
      <div id="statsTests" class="stats-tests" role="radiogroup" aria-label="{% translate 'Statistical test' %}"></div>
      <div class="stats-options">
        <label class="stats-field" id="statsPopmeanWrap" hidden><span>{% translate "Population mean" %}</span>
          <input type="number" id="statsPopmean" value="0" step="any">
        </label>
      </div>
    </div>
  {% endscitex_pane %}

  {% scitex_pane "results" label=label_results order=3 css_class="stats-pane" %}
    <header class="stats-pane__header" data-stx-pane-header>
      <h2 class="stats-pane__title">{% translate "3. Results" %}</h2>
    </header>
    <div class="stats-pane__body">
      <section id="statsSummary" class="stats-summary" aria-live="polite" hidden>
        <!-- Operator 2026-10-18 (CCT4437): the Applicable-tests rail is
            removed entirely. Applicability survives only as picker
            dim/disable + hover tooltips (applyPickerStates). -->
        <div id="statsRecCard" class="stats-rec"><ul id="statsRecNotes" class="stats-notes" hidden></ul></div>
        <div id="statsAssumptions" class="stats-assumptions"></div>
        <figure id="statsPlotSlot" class="stats-plot-slot" data-stats-plot-slot hidden></figure>
        <div class="stats-row stats-row--actions">
          <button type="button" class="stats-btn" id="statsRunAll">{% translate "Run all applicable (sensitivity)" %}</button>
        </div>
        <div id="statsRunAllOut" class="stats-runall" hidden></div>
      </section>
      <div id="statsEmpty" class="stats-empty">
        <div class="stats-empty__icon" aria-hidden="true">&sigma;</div>
        <p>{% translate "No results yet — enter data above and the recommended test runs automatically." %}</p>
      </div>
      <div id="statsResult" class="stats-result" hidden>
        <p id="statsResultTitle" class="stats-result__title"></p>
        <p id="statsFormatted" class="stats-result__formatted"></p>
        <div class="stats-row stats-row--actions" id="statsSaveRow" data-stats-save-row hidden>
          <button type="button" class="stats-btn" id="statsSaveResults">{% translate "Save results" %}</button>
          <button type="button" class="stats-btn" id="statsSaveProvenance">{% translate "Save provenance" %}</button>
          <button type="button" class="stats-btn" id="statsSaveConfig">{% translate "Save config" %}</button>
          <span class="stats-hint" id="statsSaveStatus" role="status" aria-live="polite"></span>
        </div>
        <table class="stats-table stats-table--desc" id="statsDescTable" hidden><thead id="statsDescHead"></thead><tbody id="statsDescRows"></tbody></table>
        <table class="stats-table"><tbody id="statsResultRows"></tbody></table>
        <section class="stats-plot" id="statsPlot" aria-labelledby="statsPlotTitle" hidden>
          <div class="stats-plot__head">
            <h3 class="stats-plot__title" id="statsPlotTitle">{% translate "Plot" %}</h3>
            <div class="stats-plot__actions">
              <a class="stats-btn stats-btn--ghost" id="statsPlotSvg" download="stats-plot.svg" hidden>SVG</a>
              <a class="stats-btn stats-btn--ghost" id="statsPlotPng" download="stats-plot.png" hidden>PNG</a>
              <button type="button" class="stats-btn" id="statsOpenFigrecipe" hidden>{% translate "Open in FigRecipe" %}</button>
              <button type="button" class="stats-btn stats-btn--ghost" id="statsSavePlot">{% translate "Save plot" %}</button>
            </div>
          </div>
          <div class="stats-plot__frame"><img id="statsPlotImg" class="stats-plot__img" alt="{% translate 'Plot of the test result' %}" hidden></div>
          <p id="statsPlotStatus" class="stats-hint" role="status" aria-live="polite"></p>
        </section>
        <details class="stx-acc stats-acc">
          <summary class="stats-raw__summary"><span>{% translate "Raw result" %}</span><button type="button" class="stats-btn stats-btn--ghost stats-copy" id="statsCopy" hidden><span class="stats-copy__icon" aria-hidden="true"></span><span class="stats-copy__label">{% translate "Copy" %}</span></button><span id="statsCopyStatus" class="stats-visually-hidden" role="status" aria-live="polite"></span></summary>
          <div class="stx-acc__body"><pre id="statsJson" class="stats-pre"></pre></div>
        </details>
      </div>

      <section class="stats-report" aria-labelledby="statsReportTitle">
        <h3 id="statsReportTitle" class="stats-report__title">{% translate "Report" %}</h3>
        <p class="stats-hint">{% translate "One PDF with assumption checks, the recommended test, sensitivity analyses, post-hoc comparisons, a figure and a methods paragraph." %}</p>
        <div class="stats-row">
          <button type="button" class="stats-btn stats-btn--primary" id="statsReportPdf">{% translate "Download report (PDF)" %}</button>
          <button type="button" class="stats-btn" id="statsReportSave" hidden>{% translate "Save to Files" %}</button>
        </div>
        <p id="statsReportStatus" class="stats-hint stats-report__status" role="status" aria-live="polite"></p>
      </section>

      <details class="stx-acc stats-acc">
        <summary>{% translate "Multiple-comparison correction" %}</summary>
        <div class="stx-acc__body">
          <label class="stats-field"><span>{% translate "Method" %}</span>
            <select class="stx-select" id="statsCorrMethod">
              <option value="fdr_bh" selected>FDR (Benjamini–Hochberg)</option>
              <option value="bonferroni">Bonferroni</option>
              <option value="holm">Holm</option>
              <option value="sidak">Šidák</option>
            </select>
          </label>
          <label class="stats-field"><span>{% translate "P-values" %}</span>
            <textarea id="statsCorrP" rows="2" placeholder="0.01 0.02 0.03 0.5"></textarea>
          </label>
          <button type="button" class="stats-btn" id="statsCorrect">{% translate "Correct" %}</button>
          <table class="stats-table"><tbody id="statsCorrOut"></tbody></table>
        </div>
      </details>

      <details class="stx-acc stats-acc">
        <summary>{% translate "Post-hoc comparisons" %}</summary>
        <div class="stx-acc__body">
          <p class="stats-hint">{% translate "Uses the groups in Data." %}</p>
          <label class="stats-field"><span>{% translate "Method" %}</span>
            <select class="stx-select" id="statsPhMethod">
              <option value="tukey" selected>Tukey HSD</option>
              <option value="games_howell">Games–Howell</option>
              <option value="dunnett">Dunnett</option>
            </select>
          </label>
          <button type="button" class="stats-btn" id="statsPosthoc">{% translate "Compare groups" %}</button>
          <table class="stats-table"><tbody id="statsPhOut"></tbody></table>
        </div>
      </details>
    </div>
  {% endscitex_pane %}
{% endscitex_panes %}
</div>
{% endblock %}

{% block extra_js %}
    {% scitex_js_catalog "scitex_stats._django" %}
    <script type="module" src="{% app_static 'scitex_sdk/ui/js/app/app-header.js' %}"></script>
    <script src="{% app_static 'stats/js/stx-mount.js' %}"></script>
    <script src="{% app_static 'stats/js/plot.js' %}"></script>
    <script src="{% app_static 'stats/js/app.js' %}"></script>
    <script src="{% app_static 'stats/js/recommend.js' %}"></script>
    <script src="{% app_static 'stats/js/report.js' %}"></script>
{% endblock %}