# Python compiled files
__pycache__/
*.py[cod]
*.pyo
*.pyd

# Distribution / packaging
dist/
build/
*.egg-info/
*.egg
*.whl
*.tar.gz
MANIFEST

# Virtual environments
venv/
env/
.env/
.venv/

# Testing
.pytest_cache/
.coverage
htmlcov/
.tox/

# Documentation builds
docs/_build/

# IDE-specific files
.vscode/
.idea/

# System files
.DS_Store
Thumbs.db

# Generated reports and logs
*.log
code_quality_report.*
self_analysis.*

# Project-specific ignored folders
pyrasbt/
alpyproj/
imnofin/
qzresearch/
chap/
sample_project/
evaluation/
inmotifin/
melodipyi/
pseudohnn/
simapy/
rewts/
rttarr/
sponge/
analysis/
cloned_repositories/
visualizations/
