LICENSE
README.md
pyproject.toml
aimmd/__init__.py
aimmd/__main__.py
aimmd/_config.py
aimmd/_init.py
aimmd/analysis/__init__.py
aimmd/analysis/utils.py
aimmd/cache/__init__.py
aimmd/cache/base.py
aimmd/cache/mda.py
aimmd/cache/npy.py
aimmd/core/__init__.py
aimmd/core/base.py
aimmd/core/decorators.py
aimmd/core/utils.py
aimmd/engines/__init__.py
aimmd/engines/em.mdp
aimmd/engines/toy.py
aimmd/execute/__init__.py
aimmd/execute/base.py
aimmd/execute/processes.py
aimmd/execute/threads.py
aimmd/execute/utils.py
aimmd/launcher/__init__.py
aimmd/launcher/_build.py
aimmd/launcher/_helpers.py
aimmd/launcher/_magic.py
aimmd/launcher/_methods.py
aimmd/launcher/_properties.py
aimmd/launcher/_run.py
aimmd/network/__init__.py
aimmd/network/fit.py
aimmd/network/graph_utils.py
aimmd/network/rescalable.py
aimmd/network/rescale_utils.py
aimmd/network/utils.py
aimmd/params/__init__.py
aimmd/params/_fields.py
aimmd/params/_helpers.py
aimmd/params/_io.py
aimmd/params/_magic.py
aimmd/params/_methods.py
aimmd/params/_paths.py
aimmd/params/_properties.py
aimmd/params/utils.py
aimmd/path/__init__.py
aimmd/path/_compute.py
aimmd/path/_extract.py
aimmd/path/_get.py
aimmd/path/_helpers.py
aimmd/path/_io.py
aimmd/path/_magic.py
aimmd/path/_methods.py
aimmd/path/_positions.py
aimmd/path/_properties.py
aimmd/path/chainreader.py
aimmd/path/utils.py
aimmd/pathensemble/__init__.py
aimmd/pathensemble/_helpers.py
aimmd/pathensemble/_io.py
aimmd/pathensemble/_magic.py
aimmd/pathensemble/_methods.py
aimmd/pathensemble/_positions.py
aimmd/pathensemble/_project.py
aimmd/pathensemble/_properties.py
aimmd/pathensemble/_report.py
aimmd/pathensemble/_reweight.py
aimmd/pathensemble/bias_utils.py
aimmd/pathensemble/reweight.py
aimmd/pathensemble/utils.py
aimmd/resources/__init__.py
aimmd/resources/binding.py
aimmd/resources/cpu.py
aimmd/resources/gpu.py
aimmd/worker/__init__.py
aimmd/worker/_free.py
aimmd/worker/_helpers.py
aimmd/worker/_magic.py
aimmd/worker/_properties.py
aimmd/worker/_run.py
aimmd/worker/_shoot.py
aimmd/worker/_simulate.py
aimmd/worker/_train.py
aimmd/worker/run.py
aimmd/worker/utils.py
aimmd_lab.egg-info/PKG-INFO
aimmd_lab.egg-info/SOURCES.txt
aimmd_lab.egg-info/dependency_links.txt
aimmd_lab.egg-info/requires.txt
aimmd_lab.egg-info/top_level.txt
tests/test_analysis_utils.py
tests/test_bias_utils.py
tests/test_cache_mda.py
tests/test_cache_npy.py
tests/test_core_utils.py
tests/test_flexible_features.py
tests/test_graph_utils_optional.py
tests/test_gromacs_guard.py
tests/test_multi_system.py
tests/test_network_fit_unit.py
tests/test_network_utils.py
tests/test_params.py
tests/test_params_methods_runtime.py
tests/test_params_paths_unit.py
tests/test_params_unit.py
tests/test_path_core.py
tests/test_path_methods_extended.py
tests/test_pathensemble_core.py
tests/test_pathensemble_project_report.py
tests/test_pathensemble_reweight.py
tests/test_plumed_backup_cleanup.py
tests/test_resources_execute.py
tests/test_retinal.py
tests/test_subsample.py
tests/test_sweep_validation.py
tests/test_toy_1d.py
tests/test_toy_engine.py
tests/test_worker_launcher_lowlevel.py
tests/test_worker_runtime_unit.py
tests/test_worker_utils.py