MANIFEST.in
README.md
pixi.toml
pyproject.toml
tests/test_blastn.py
tests/test_diamond.py
tests/test_exporter.py
tests/test_hmm.py
tests/test_html_report.py
tests/test_orfs.py
tests/test_parser.py
tests/test_report.py
tests/test_salmon_quant.py
tests/test_score_ai.py
tests/test_tax.py
tests/test_track_seqs.py
viralquest/__init__.py
viralquest/biodata.py
viralquest/blastn.py
viralquest/cli.py
viralquest/cli_report.py
viralquest/coverage.py
viralquest/diamond.py
viralquest/download_dbs.py
viralquest/exporter.py
viralquest/hmm.py
viralquest/html_report.py
viralquest/orfs.py
viralquest/output.py
viralquest/parser.py
viralquest/report_builder.py
viralquest/report_clusters.py
viralquest/report_data.py
viralquest/report_loader.py
viralquest/salmon_quant.py
viralquest/score_ai.py
viralquest/score_heuristic.py
viralquest/seq_quality.py
viralquest/setup_env.py
viralquest/tax.py
viralquest/track_seqs.py
viralquest.egg-info/PKG-INFO
viralquest.egg-info/SOURCES.txt
viralquest.egg-info/dependency_links.txt
viralquest.egg-info/entry_points.txt
viralquest.egg-info/requires.txt
viralquest.egg-info/top_level.txt
viralquest/components/base.css
viralquest/components/demo-data.js
viralquest/components/demo.html
viralquest/components/export.js
viralquest/components/section_about.js
viralquest/components/section_clusters.js
viralquest/components/section_salmon.js
viralquest/components/section_stats.js
viralquest/components/section_taxonomy.js
viralquest/components/section_viewer.js
viralquest/components/shell.html
viralquest/components-report/base.css
viralquest/components-report/export.js
viralquest/components-report/section_about.js
viralquest/components-report/section_clusters.js
viralquest/components-report/section_overview.js
viralquest/components-report/section_quant.js
viralquest/components-report/section_viewer.js
viralquest/components-report/section_viewer_report.js
viralquest/components-report/shell.html
viralquest/components-report/assets/favicon.png
viralquest/components-report/assets/logo-bg-text.png
viralquest/components-report/assets/logo-text.png
viralquest/components/assets/favicon.png
viralquest/components/assets/logo-bg-text.png
viralquest/components/assets/logo-text.png