README.md
pyproject.toml
src/govcf/__init__.py
src/govcf/bed_filter.py
src/govcf/variant_files.py
src/govcf.egg-info/PKG-INFO
src/govcf.egg-info/SOURCES.txt
src/govcf.egg-info/dependency_links.txt
src/govcf.egg-info/requires.txt
src/govcf.egg-info/top_level.txt
src/govcf/calculate_vaf/__init__.py
src/govcf/calculate_vaf/ad_rd_dp.py
src/govcf/calculate_vaf/ao_ro_dp.py
src/govcf/calculate_vaf/base.py
src/govcf/calculate_vaf/brli.py
src/govcf/calculate_vaf/clcbio.py
src/govcf/calculate_vaf/fao_fdp.py
src/govcf/calculate_vaf/pheo.py
src/govcf/calculate_vaf/strelka.py
src/govcf/calculate_vaf/usc.py
src/govcf/calculate_vaf/utils.py
tests/test_bed_file.py
tests/test_calc_vaf.py
tests/test_variant_files.py