__LOG_FILE__ /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.0001_tiles0001-0196.log
bcl-convert Version 00.000.000.4.0.3
bcl-convert command: singularity exec --bind /fsx:/fsx docker://nfcore/bclconvert:4.0.3 bcl-convert --bcl-input-directory /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 --output-directory results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0001_tiles0001-0196 --sample-sheet results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0001_tiles0001-0196/SampleSheet.csv --strict-mode false --first-tile-only false --bcl-sampleproject-subdirectories false --fastq-gzip-compression-level 1 --bcl-num-parallel-tiles 8 --bcl-num-conversion-threads 2 --bcl-num-compression-threads 24 --bcl-num-decompression-threads 8 --shared-thread-odirect-output true --output-legacy-stats true --num-unknown-barcodes-reported 1000 --tiles s_3_1101+s_3_1102+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108+s_3_1109+s_3_1110+s_3_1111+s_3_1112+s_3_1113+s_3_1114+s_3_1115+s_3_1116+s_3_1117+s_3_1118+s_3_1119+s_3_1120+s_3_1121+s_3_1122+s_3_1123+s_3_1124+s_3_1125+s_3_1126+s_3_1127+s_3_1128+s_3_1129+s_3_1130+s_3_1131+s_3_1132+s_3_1133+s_3_1134+s_3_1135+s_3_1136+s_3_1137+s_3_1138+s_3_1139+s_3_1140+s_3_1141+s_3_1142+s_3_1143+s_3_1144+s_3_1145+s_3_1146+s_3_1147+s_3_1148+s_3_1149+s_3_1150+s_3_1151+s_3_1152+s_3_1153+s_3_1154+s_3_1155+s_3_1156+s_3_1157+s_3_1158+s_3_1159+s_3_1160+s_3_1161+s_3_1162+s_3_1163+s_3_1164+s_3_1165+s_3_1166+s_3_1167+s_3_1168+s_3_1169+s_3_1170+s_3_1171+s_3_1172+s_3_1173+s_3_1174+s_3_1175+s_3_1176+s_3_1177+s_3_1178+s_3_1179+s_3_1180+s_3_1181+s_3_1182+s_3_1183+s_3_1184+s_3_1185+s_3_1186+s_3_1187+s_3_1188+s_3_1189+s_3_1190+s_3_1191+s_3_1192+s_3_1193+s_3_1194+s_3_1195+s_3_1196+s_3_1197+s_3_1198+s_3_1201+s_3_1202+s_3_1203+s_3_1204+s_3_1205+s_3_1206+s_3_1207+s_3_1208+s_3_1209+s_3_1210+s_3_1211+s_3_1212+s_3_1213+s_3_1214+s_3_1215+s_3_1216+s_3_1217+s_3_1218+s_3_1219+s_3_1220+s_3_1221+s_3_1222+s_3_1223+s_3_1224+s_3_1225+s_3_1226+s_3_1227+s_3_1228+s_3_1229+s_3_1230+s_3_1231+s_3_1232+s_3_1233+s_3_1234+s_3_1235+s_3_1236+s_3_1237+s_3_1238+s_3_1239+s_3_1240+s_3_1241+s_3_1242+s_3_1243+s_3_1244+s_3_1245+s_3_1246+s_3_1247+s_3_1248+s_3_1249+s_3_1250+s_3_1251+s_3_1252+s_3_1253+s_3_1254+s_3_1255+s_3_1256+s_3_1257+s_3_1258+s_3_1259+s_3_1260+s_3_1261+s_3_1262+s_3_1263+s_3_1264+s_3_1265+s_3_1266+s_3_1267+s_3_1268+s_3_1269+s_3_1270+s_3_1271+s_3_1272+s_3_1273+s_3_1274+s_3_1275+s_3_1276+s_3_1277+s_3_1278+s_3_1279+s_3_1280+s_3_1281+s_3_1282+s_3_1283+s_3_1284+s_3_1285+s_3_1286+s_3_1287+s_3_1288+s_3_1289+s_3_1290+s_3_1291+s_3_1292+s_3_1293+s_3_1294+s_3_1295+s_3_1296+s_3_1297+s_3_1298 -f
WARNING: skipping lane 1 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 2 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 4 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 5 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 6 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 7 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 8 because RunInfo.xml file lists no tiles for it
  SoftwareVersion = 4.0.3
WARNING: shared-thread-linux-native-asio output could have low performance or hang if output directory is on a distributed file system
bcl-convert Version 00.000.000.4.0.3
__LOG_TAIL__ /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.0001_tiles0001-0196.log
prepared_lane_samplesheet lane=3 settings={"BarcodeMismatchesIndex1": "0", "BarcodeMismatchesIndex2": "0"} out=results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0001_tiles0001-0196/SampleSheet.csv
run_bclconvert_lane L003 started: 2026-06-02T01:39:28+00:00
host: i192mem-dy-all-1
threads: 48
TMPDIR: /dev/shm
bcl_input_directory: /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4
output_directory: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0001_tiles0001-0196
sample_sheet: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0001_tiles0001-0196/SampleSheet.csv
bcl_only_lane: 3
tile_regex: s_3_1101+s_3_1102+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108+s_3_1109+s_3_1110+s_3_1111+s_3_1112+s_3_1113+s_3_1114+s_3_1115+s_3_1116+s_3_1117+s_3_1118+s_3_1119+s_3_1120+s_3_1121+s_3_1122+s_3_1123+s_3_1124+s_3_1125+s_3_1126+s_3_1127+s_3_1128+s_3_1129+s_3_1130+s_3_1131+s_3_1132+s_3_1133+s_3_1134+s_3_1135+s_3_1136+s_3_1137+s_3_1138+s_3_1139+s_3_1140+s_3_1141+s_3_1142+s_3_1143+s_3_1144+s_3_1145+s_3_1146+s_3_1147+s_3_1148+s_3_1149+s_3_1150+s_3_1151+s_3_1152+s_3_1153+s_3_1154+s_3_1155+s_3_1156+s_3_1157+s_3_1158+s_3_1159+s_3_1160+s_3_1161+s_3_1162+s_3_1163+s_3_1164+s_3_1165+s_3_1166+s_3_1167+s_3_1168+s_3_1169+s_3_1170+s_3_1171+s_3_1172+s_3_1173+s_3_1174+s_3_1175+s_3_1176+s_3_1177+s_3_1178+s_3_1179+s_3_1180+s_3_1181+s_3_1182+s_3_1183+s_3_1184+s_3_1185+s_3_1186+s_3_1187+s_3_1188+s_3_1189+s_3_1190+s_3_1191+s_3_1192+s_3_1193+s_3_1194+s_3_1195+s_3_1196+s_3_1197+s_3_1198+s_3_1201+s_3_1202+s_3_1203+s_3_1204+s_3_1205+s_3_1206+s_3_1207+s_3_1208+s_3_1209+s_3_1210+s_3_1211+s_3_1212+s_3_1213+s_3_1214+s_3_1215+s_3_1216+s_3_1217+s_3_1218+s_3_1219+s_3_1220+s_3_1221+s_3_1222+s_3_1223+s_3_1224+s_3_1225+s_3_1226+s_3_1227+s_3_1228+s_3_1229+s_3_1230+s_3_1231+s_3_1232+s_3_1233+s_3_1234+s_3_1235+s_3_1236+s_3_1237+s_3_1238+s_3_1239+s_3_1240+s_3_1241+s_3_1242+s_3_1243+s_3_1244+s_3_1245+s_3_1246+s_3_1247+s_3_1248+s_3_1249+s_3_1250+s_3_1251+s_3_1252+s_3_1253+s_3_1254+s_3_1255+s_3_1256+s_3_1257+s_3_1258+s_3_1259+s_3_1260+s_3_1261+s_3_1262+s_3_1263+s_3_1264+s_3_1265+s_3_1266+s_3_1267+s_3_1268+s_3_1269+s_3_1270+s_3_1271+s_3_1272+s_3_1273+s_3_1274+s_3_1275+s_3_1276+s_3_1277+s_3_1278+s_3_1279+s_3_1280+s_3_1281+s_3_1282+s_3_1283+s_3_1284+s_3_1285+s_3_1286+s_3_1287+s_3_1288+s_3_1289+s_3_1290+s_3_1291+s_3_1292+s_3_1293+s_3_1294+s_3_1295+s_3_1296+s_3_1297+s_3_1298
sample_sheet_settings_json: {"BarcodeMismatchesIndex1": "0", "BarcodeMismatchesIndex2": "0"}
sample_sheet_settings_by_lane_json: {}
output_legacy_stats: true
num_unknown_barcodes_reported: 1000
48
Filesystem                Size  Used Avail Use% Mounted on
tmpfs                     605G     0  605G   0% /dev/shm
10.0.1.248@tcp:/3vbzxb4v  6.6T  1.4T  5.2T  22% /fsx
10.0.1.248@tcp:/3vbzxb4v  6.6T  1.4T  5.2T  22% /fsx
/usr/bin/singularity
singularity_bind_args: --bind /fsx:/fsx
INFO:    Using cached SIF image
bcl-convert Version 00.000.000.4.0.3
Copyright (c) 2014-2018 Illumina, Inc. 
bcl_num_parallel_tiles: 8
bcl_num_conversion_threads: 2
bcl_num_compression_threads: 24
bcl_num_decompression_threads: 8
bcl_cpu_heavy_threads: 48
bcl-convert command: singularity exec --bind /fsx:/fsx docker://nfcore/bclconvert:4.0.3 bcl-convert --bcl-input-directory /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 --output-directory results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0001_tiles0001-0196 --sample-sheet results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0001_tiles0001-0196/SampleSheet.csv --strict-mode false --first-tile-only false --bcl-sampleproject-subdirectories false --fastq-gzip-compression-level 1 --bcl-num-parallel-tiles 8 --bcl-num-conversion-threads 2 --bcl-num-compression-threads 24 --bcl-num-decompression-threads 8 --shared-thread-odirect-output true --output-legacy-stats true --num-unknown-barcodes-reported 1000 --tiles s_3_1101+s_3_1102+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108+s_3_1109+s_3_1110+s_3_1111+s_3_1112+s_3_1113+s_3_1114+s_3_1115+s_3_1116+s_3_1117+s_3_1118+s_3_1119+s_3_1120+s_3_1121+s_3_1122+s_3_1123+s_3_1124+s_3_1125+s_3_1126+s_3_1127+s_3_1128+s_3_1129+s_3_1130+s_3_1131+s_3_1132+s_3_1133+s_3_1134+s_3_1135+s_3_1136+s_3_1137+s_3_1138+s_3_1139+s_3_1140+s_3_1141+s_3_1142+s_3_1143+s_3_1144+s_3_1145+s_3_1146+s_3_1147+s_3_1148+s_3_1149+s_3_1150+s_3_1151+s_3_1152+s_3_1153+s_3_1154+s_3_1155+s_3_1156+s_3_1157+s_3_1158+s_3_1159+s_3_1160+s_3_1161+s_3_1162+s_3_1163+s_3_1164+s_3_1165+s_3_1166+s_3_1167+s_3_1168+s_3_1169+s_3_1170+s_3_1171+s_3_1172+s_3_1173+s_3_1174+s_3_1175+s_3_1176+s_3_1177+s_3_1178+s_3_1179+s_3_1180+s_3_1181+s_3_1182+s_3_1183+s_3_1184+s_3_1185+s_3_1186+s_3_1187+s_3_1188+s_3_1189+s_3_1190+s_3_1191+s_3_1192+s_3_1193+s_3_1194+s_3_1195+s_3_1196+s_3_1197+s_3_1198+s_3_1201+s_3_1202+s_3_1203+s_3_1204+s_3_1205+s_3_1206+s_3_1207+s_3_1208+s_3_1209+s_3_1210+s_3_1211+s_3_1212+s_3_1213+s_3_1214+s_3_1215+s_3_1216+s_3_1217+s_3_1218+s_3_1219+s_3_1220+s_3_1221+s_3_1222+s_3_1223+s_3_1224+s_3_1225+s_3_1226+s_3_1227+s_3_1228+s_3_1229+s_3_1230+s_3_1231+s_3_1232+s_3_1233+s_3_1234+s_3_1235+s_3_1236+s_3_1237+s_3_1238+s_3_1239+s_3_1240+s_3_1241+s_3_1242+s_3_1243+s_3_1244+s_3_1245+s_3_1246+s_3_1247+s_3_1248+s_3_1249+s_3_1250+s_3_1251+s_3_1252+s_3_1253+s_3_1254+s_3_1255+s_3_1256+s_3_1257+s_3_1258+s_3_1259+s_3_1260+s_3_1261+s_3_1262+s_3_1263+s_3_1264+s_3_1265+s_3_1266+s_3_1267+s_3_1268+s_3_1269+s_3_1270+s_3_1271+s_3_1272+s_3_1273+s_3_1274+s_3_1275+s_3_1276+s_3_1277+s_3_1278+s_3_1279+s_3_1280+s_3_1281+s_3_1282+s_3_1283+s_3_1284+s_3_1285+s_3_1286+s_3_1287+s_3_1288+s_3_1289+s_3_1290+s_3_1291+s_3_1292+s_3_1293+s_3_1294+s_3_1295+s_3_1296+s_3_1297+s_3_1298 -f
INFO:    Using cached SIF image
WARNING: skipping lane 1 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 2 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 4 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 5 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 6 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 7 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 8 because RunInfo.xml file lists no tiles for it
Index Read 2 is marked as Reverse Complement in RunInfo.xml: The barcode and UMI outputs will be output in Reverse Complement of Sample Sheet inputs.
Sample sheet being processed by common lib? Yes
SampleSheet Settings: 
  BarcodeMismatchesIndex1 = 0
  BarcodeMismatchesIndex2 = 0
  FastqCompressionFormat = gzip
  OverrideCycles = Y151;I10;I10;Y151
  SoftwareVersion = 4.0.3

shared-thread-linux-native-asio output is enabled
WARNING: shared-thread-linux-native-asio output could have low performance or hang if output directory is on a distributed file system
bcl-convert Version 00.000.000.4.0.3
Copyright (c) 2014-2022 Illumina, Inc.
Command Line: --bcl-input-directory /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 --output-directory results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0001_tiles0001-0196 --sample-sheet results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0001_tiles0001-0196/SampleSheet.csv --strict-mode false --first-tile-only false --bcl-sampleproject-subdirectories false --fastq-gzip-compression-level 1 --bcl-num-parallel-tiles 8 --bcl-num-conversion-threads 2 --bcl-num-compression-threads 24 --bcl-num-decompression-threads 8 --shared-thread-odirect-output true --output-legacy-stats true --num-unknown-barcodes-reported 1000 --tiles s_3_1101+s_3_1102+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108+s_3_1109+s_3_1110+s_3_1111+s_3_1112+s_3_1113+s_3_1114+s_3_1115+s_3_1116+s_3_1117+s_3_1118+s_3_1119+s_3_1120+s_3_1121+s_3_1122+s_3_1123+s_3_1124+s_3_1125+s_3_1126+s_3_1127+s_3_1128+s_3_1129+s_3_1130+s_3_1131+s_3_1132+s_3_1133+s_3_1134+s_3_1135+s_3_1136+s_3_1137+s_3_1138+s_3_1139+s_3_1140+s_3_1141+s_3_1142+s_3_1143+s_3_1144+s_3_1145+s_3_1146+s_3_1147+s_3_1148+s_3_1149+s_3_1150+s_3_1151+s_3_1152+s_3_1153+s_3_1154+s_3_1155+s_3_1156+s_3_1157+s_3_1158+s_3_1159+s_3_1160+s_3_1161+s_3_1162+s_3_1163+s_3_1164+s_3_1165+s_3_1166+s_3_1167+s_3_1168+s_3_1169+s_3_1170+s_3_1171+s_3_1172+s_3_1173+s_3_1174+s_3_1175+s_3_1176+s_3_1177+s_3_1178+s_3_1179+s_3_1180+s_3_1181+s_3_1182+s_3_1183+s_3_1184+s_3_1185+s_3_1186+s_3_1187+s_3_1188+s_3_1189+s_3_1190+s_3_1191+s_3_1192+s_3_1193+s_3_1194+s_3_1195+s_3_1196+s_3_1197+s_3_1198+s_3_1201+s_3_1202+s_3_1203+s_3_1204+s_3_1205+s_3_1206+s_3_1207+s_3_1208+s_3_1209+s_3_1210+s_3_1211+s_3_1212+s_3_1213+s_3_1214+s_3_1215+s_3_1216+s_3_1217+s_3_1218+s_3_1219+s_3_1220+s_3_1221+s_3_1222+s_3_1223+s_3_1224+s_3_1225+s_3_1226+s_3_1227+s_3_1228+s_3_1229+s_3_1230+s_3_1231+s_3_1232+s_3_1233+s_3_1234+s_3_1235+s_3_1236+s_3_1237+s_3_1238+s_3_1239+s_3_1240+s_3_1241+s_3_1242+s_3_1243+s_3_1244+s_3_1245+s_3_1246+s_3_1247+s_3_1248+s_3_1249+s_3_1250+s_3_1251+s_3_1252+s_3_1253+s_3_1254+s_3_1255+s_3_1256+s_3_1257+s_3_1258+s_3_1259+s_3_1260+s_3_1261+s_3_1262+s_3_1263+s_3_1264+s_3_1265+s_3_1266+s_3_1267+s_3_1268+s_3_1269+s_3_1270+s_3_1271+s_3_1272+s_3_1273+s_3_1274+s_3_1275+s_3_1276+s_3_1277+s_3_1278+s_3_1279+s_3_1280+s_3_1281+s_3_1282+s_3_1283+s_3_1284+s_3_1285+s_3_1286+s_3_1287+s_3_1288+s_3_1289+s_3_1290+s_3_1291+s_3_1292+s_3_1293+s_3_1294+s_3_1295+s_3_1296+s_3_1297+s_3_1298 -f 
Conversion Begins.
# CPU hw threads available: 64
Parallel Tiles: 8. Threads Per Tile: 2
SW compressors: 24
SW decompressors: 8
SW FASTQ compression level: 1
Conversion Complete.
run_bclconvert_lane L003 finished: 2026-06-02T01:50:17+00:00
__LOG_FILE__ /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.0002_tiles0197-0392.log
bcl-convert Version 00.000.000.4.0.3
bcl-convert command: singularity exec --bind /fsx:/fsx docker://nfcore/bclconvert:4.0.3 bcl-convert --bcl-input-directory /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 --output-directory results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0002_tiles0197-0392 --sample-sheet results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0002_tiles0197-0392/SampleSheet.csv --strict-mode false --first-tile-only false --bcl-sampleproject-subdirectories false --fastq-gzip-compression-level 1 --bcl-num-parallel-tiles 8 --bcl-num-conversion-threads 2 --bcl-num-compression-threads 24 --bcl-num-decompression-threads 8 --shared-thread-odirect-output true --output-legacy-stats true --num-unknown-barcodes-reported 1000 --tiles s_3_1301+s_3_1302+s_3_1303+s_3_1304+s_3_1305+s_3_1306+s_3_1307+s_3_1308+s_3_1309+s_3_1310+s_3_1311+s_3_1312+s_3_1313+s_3_1314+s_3_1315+s_3_1316+s_3_1317+s_3_1318+s_3_1319+s_3_1320+s_3_1321+s_3_1322+s_3_1323+s_3_1324+s_3_1325+s_3_1326+s_3_1327+s_3_1328+s_3_1329+s_3_1330+s_3_1331+s_3_1332+s_3_1333+s_3_1334+s_3_1335+s_3_1336+s_3_1337+s_3_1338+s_3_1339+s_3_1340+s_3_1341+s_3_1342+s_3_1343+s_3_1344+s_3_1345+s_3_1346+s_3_1347+s_3_1348+s_3_1349+s_3_1350+s_3_1351+s_3_1352+s_3_1353+s_3_1354+s_3_1355+s_3_1356+s_3_1357+s_3_1358+s_3_1359+s_3_1360+s_3_1361+s_3_1362+s_3_1363+s_3_1364+s_3_1365+s_3_1366+s_3_1367+s_3_1368+s_3_1369+s_3_1370+s_3_1371+s_3_1372+s_3_1373+s_3_1374+s_3_1375+s_3_1376+s_3_1377+s_3_1378+s_3_1379+s_3_1380+s_3_1381+s_3_1382+s_3_1383+s_3_1384+s_3_1385+s_3_1386+s_3_1387+s_3_1388+s_3_1389+s_3_1390+s_3_1391+s_3_1392+s_3_1393+s_3_1394+s_3_1395+s_3_1396+s_3_1397+s_3_1398+s_3_1401+s_3_1402+s_3_1403+s_3_1404+s_3_1405+s_3_1406+s_3_1407+s_3_1408+s_3_1409+s_3_1410+s_3_1411+s_3_1412+s_3_1413+s_3_1414+s_3_1415+s_3_1416+s_3_1417+s_3_1418+s_3_1419+s_3_1420+s_3_1421+s_3_1422+s_3_1423+s_3_1424+s_3_1425+s_3_1426+s_3_1427+s_3_1428+s_3_1429+s_3_1430+s_3_1431+s_3_1432+s_3_1433+s_3_1434+s_3_1435+s_3_1436+s_3_1437+s_3_1438+s_3_1439+s_3_1440+s_3_1441+s_3_1442+s_3_1443+s_3_1444+s_3_1445+s_3_1446+s_3_1447+s_3_1448+s_3_1449+s_3_1450+s_3_1451+s_3_1452+s_3_1453+s_3_1454+s_3_1455+s_3_1456+s_3_1457+s_3_1458+s_3_1459+s_3_1460+s_3_1461+s_3_1462+s_3_1463+s_3_1464+s_3_1465+s_3_1466+s_3_1467+s_3_1468+s_3_1469+s_3_1470+s_3_1471+s_3_1472+s_3_1473+s_3_1474+s_3_1475+s_3_1476+s_3_1477+s_3_1478+s_3_1479+s_3_1480+s_3_1481+s_3_1482+s_3_1483+s_3_1484+s_3_1485+s_3_1486+s_3_1487+s_3_1488+s_3_1489+s_3_1490+s_3_1491+s_3_1492+s_3_1493+s_3_1494+s_3_1495+s_3_1496+s_3_1497+s_3_1498 -f
WARNING: skipping lane 1 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 2 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 4 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 5 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 6 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 7 because RunInfo.xml file lists no tiles for it
WARNING: skipping lane 8 because RunInfo.xml file lists no tiles for it
  SoftwareVersion = 4.0.3
WARNING: shared-thread-linux-native-asio output could have low performance or hang if output directory is on a distributed file system
bcl-convert Version 00.000.000.4.0.3
__LOG_TAIL__ /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.0002_tiles0197-0392.log
prepared_lane_samplesheet lane=3 settings={"BarcodeMismatchesIndex1": "0", "BarcodeMismatchesIndex2": "0"} out=results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0002_tiles0197-0392/SampleSheet.csv
run_bclconvert_lane L003 started: 2026-06-02T01:39:26+00:00
host: i192mem-dy-all-1
threads: 48
TMPDIR: /dev/shm
bcl_input_directory: /fsx/analysis_results/ubuntu/bcl25b_l003_shard004_20260602T000733Z/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4
output_directory: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_fastqs/L003/0002_tiles0197-0392
sample_sheet: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/tile_reports/L003/0002_tiles0197-0392/SampleSheet.csv
bcl_only_lane: 3
tile_regex: s_3_1301+s_3_1302+s_3_1303+s_3_1304+s_3_1305+s_3_1306+s_3_1307+s_3_1308+s_3_1309+s_3_1310+s_3_1311+s_3_1312+s_3_1313+s_3_1314+s_3_1315+s_3_1316+s_3_1317+s_3_1318+s_3_1319+s_3_1320+s_3_1321+s_3_1322+s_3_1323+s_3_1324--output truncated--
