LICENSE
README.md
pyproject.toml
RNAvigate.egg-info/PKG-INFO
RNAvigate.egg-info/SOURCES.txt
RNAvigate.egg-info/dependency_links.txt
RNAvigate.egg-info/requires.txt
RNAvigate.egg-info/top_level.txt
rnavigate/__init__.py
rnavigate/data_loading.py
rnavigate/helper_functions.py
rnavigate/plotting_functions.py
rnavigate/rnavigate.py
rnavigate/styles.py
rnavigate/analysis/__init__.py
rnavigate/analysis/auroc.py
rnavigate/analysis/check_sequence.py
rnavigate/analysis/deltashape.py
rnavigate/analysis/fragmapper.py
rnavigate/analysis/logcompare.py
rnavigate/analysis/lowss.py
rnavigate/data/__init__.py
rnavigate/data/alignments.py
rnavigate/data/annotation.py
rnavigate/data/colors.py
rnavigate/data/data.py
rnavigate/data/interactions.py
rnavigate/data/pdb.py
rnavigate/data/profile.py
rnavigate/data/secondary_structure.py
rnavigate/examples/__init__.py
rnavigate/examples/rmrp_data/RMRP-RNPMaP-Example_RESULTS.csv
rnavigate/examples/rmrp_data/__init__.py
rnavigate/examples/rmrp_data/hs-RMRP.nsd
rnavigate/examples/rnasep_data/3dhsCrystal_PlusLoops.pdb
rnavigate/examples/rnasep_data/RC_CRYSTAL_STRUCTURE.xrna
rnavigate/examples/rnasep_data/RNaseP-lit-like.nsd
rnavigate/examples/rnasep_data/RNaseP-noSC.fasta
rnavigate/examples/rnasep_data/RNaseP-withSC.fasta
rnavigate/examples/rnasep_data/RNaseP.ct
rnavigate/examples/rnasep_data/__init__.py
rnavigate/examples/rnasep_data/example-rnasep-deletions.txt
rnavigate/examples/rnasep_data/example1-rnasep-pairmap.txt
rnavigate/examples/rnasep_data/example1-rnasep.corrs
rnavigate/examples/rnasep_data/example1_rnasep_profile.txt
rnavigate/examples/rnasep_data/example1_shapemapper_log.txt
rnavigate/examples/rnasep_data/example2-rnasep-pairmap.txt
rnavigate/examples/rnasep_data/example2-rnasep.corrs
rnavigate/examples/rnasep_data/example2_rnasep_profile.txt
rnavigate/examples/rnasep_data/example2_shapemapper_log.txt
rnavigate/examples/rnasep_data/example3-rnasep-pairmap.txt
rnavigate/examples/rnasep_data/example3-rnasep.corrs
rnavigate/examples/rnasep_data/example3_rnasep_profile.txt
rnavigate/examples/rnasep_data/example3_shapemapper_log.txt
rnavigate/examples/rnasep_data/example4-rnasep-pairmap.txt
rnavigate/examples/rnasep_data/example4-rnasep.corrs
rnavigate/examples/rnasep_data/example4_rnasep_profile.txt
rnavigate/examples/rnasep_data/example4_shapemapper_log.txt
rnavigate/examples/rnasep_data/rnasep.dp
rnavigate/examples/rrna_fragmap_data/2_Methyl_DMSO_subtracted_LSU_profile.txt
rnavigate/examples/rrna_fragmap_data/2_QN_DMSO_subtracted_LSU_profile.txt
rnavigate/examples/rrna_fragmap_data/2_ZLD_DMSO_subtracted_LSU_profile.txt
rnavigate/examples/rrna_fragmap_data/6HA1_LSU.fasta
rnavigate/examples/rrna_fragmap_data/6HA1_LSU.json
rnavigate/examples/rrna_fragmap_data/6HA1_LSU.pdb
rnavigate/examples/rrna_fragmap_data/6HA1_LSU.txt
rnavigate/examples/rrna_fragmap_data/6HA1_SSU.fasta
rnavigate/examples/rrna_fragmap_data/6HA1_SSU.json
rnavigate/examples/rrna_fragmap_data/6HA1_SSU.pdb
rnavigate/examples/rrna_fragmap_data/__init__.py
rnavigate/examples/tpp_data/2gdi.pdb
rnavigate/examples/tpp_data/DMS_TPP_profile.txt
rnavigate/examples/tpp_data/DMS_TPP_rings.txt
rnavigate/examples/tpp_data/TPP-2GDI.nsd
rnavigate/examples/tpp_data/TPP-dms-bp.dp
rnavigate/examples/tpp_data/__init__.py
rnavigate/plots/__init__.py
rnavigate/plots/alignment.py
rnavigate/plots/arc.py
rnavigate/plots/circle.py
rnavigate/plots/disthist.py
rnavigate/plots/heatmap.py
rnavigate/plots/linreg.py
rnavigate/plots/mol.py
rnavigate/plots/ntdist.py
rnavigate/plots/plots.py
rnavigate/plots/profile.py
rnavigate/plots/qc.py
rnavigate/plots/roc.py
rnavigate/plots/skyline.py
rnavigate/plots/sm.py
rnavigate/plots/ss.py
rnavigate/plots/functions/__init__.py
rnavigate/plots/functions/circle.py
rnavigate/plots/functions/functions.py
rnavigate/plots/functions/ss.py
rnavigate/plots/functions/tracks.py
rnavigate/transcriptomics/__init__.py
rnavigate/transcriptomics/bed.py
rnavigate/transcriptomics/eclip.py
rnavigate/transcriptomics/transcriptome.py
tests/test_import.py