LICENSE
README.md
setup.py
src/svpg/SVCluster.py
src/svpg/SVCollect.py
src/svpg/SVGenotype.py
src/svpg/SVPan.py
src/svpg/SVSignature.py
src/svpg/__init__.py
src/svpg/graph_augment.py
src/svpg/input_parsing.py
src/svpg/main.py
src/svpg/main_.py
src/svpg/main_back.py
src/svpg/output_vcf.py
src/svpg/phased_hap_recall.py
src/svpg/realign.py
src/svpg/run_longcallD.py
src/svpg/util.py
src/svpg.egg-info/PKG-INFO
src/svpg.egg-info/SOURCES.txt
src/svpg.egg-info/dependency_links.txt
src/svpg.egg-info/entry_points.txt
src/svpg.egg-info/requires.txt
src/svpg.egg-info/top_level.txt