LICENSE
README.md
pyproject.toml
src/ftmwpipeline/__init__.py
src/ftmwpipeline/__main__.py
src/ftmwpipeline/api.py
src/ftmwpipeline/file_manager.py
src/ftmwpipeline/pipeline.py
src/ftmwpipeline/workflows.py
src/ftmwpipeline.egg-info/PKG-INFO
src/ftmwpipeline.egg-info/SOURCES.txt
src/ftmwpipeline.egg-info/dependency_links.txt
src/ftmwpipeline.egg-info/entry_points.txt
src/ftmwpipeline.egg-info/requires.txt
src/ftmwpipeline.egg-info/top_level.txt
src/ftmwpipeline/_internal/__init__.py
src/ftmwpipeline/_internal/active_ft_support.py
src/ftmwpipeline/_internal/catalog_xref.py
src/ftmwpipeline/_internal/clocks_impl.py
src/ftmwpipeline/_internal/progress.py
src/ftmwpipeline/_internal/report_diff_impl.py
src/ftmwpipeline/_internal/report_html_impl.py
src/ftmwpipeline/_internal/report_impl.py
src/ftmwpipeline/_internal/run_impl.py
src/ftmwpipeline/_internal/shape_recommendation_impl.py
src/ftmwpipeline/_internal/shared_utils.py
src/ftmwpipeline/_internal/stage0_impl.py
src/ftmwpipeline/_internal/stage1_impl.py
src/ftmwpipeline/_internal/stage2_impl.py
src/ftmwpipeline/_internal/stage2b_impl.py
src/ftmwpipeline/_internal/stage3_impl.py
src/ftmwpipeline/_internal/stage4_impl.py
src/ftmwpipeline/_internal/stage5_impl.py
src/ftmwpipeline/_internal/stage5_validation_impl.py
src/ftmwpipeline/_internal/stage6_impl.py
src/ftmwpipeline/_internal/start_detection_impl.py
src/ftmwpipeline/_internal/tau_settings_resolution.py
src/ftmwpipeline/_internal/timebase_impl.py
src/ftmwpipeline/_internal/tuning/__init__.py
src/ftmwpipeline/_internal/tuning/engine.py
src/ftmwpipeline/_internal/tuning/fit_support.py
src/ftmwpipeline/_internal/tuning/plots.py
src/ftmwpipeline/_internal/tuning/registry.py
src/ftmwpipeline/_internal/tuning/settings_inspection.py
src/ftmwpipeline/_internal/tuning/settings_mutation.py
src/ftmwpipeline/cli/__init__.py
src/ftmwpipeline/cli/_argspec.py
src/ftmwpipeline/cli/clocks_commands.py
src/ftmwpipeline/cli/data_commands.py
src/ftmwpipeline/cli/fitting_commands.py
src/ftmwpipeline/cli/ft_commands.py
src/ftmwpipeline/cli/info_commands.py
src/ftmwpipeline/cli/main.py
src/ftmwpipeline/cli/noise_commands.py
src/ftmwpipeline/cli/peak_commands.py
src/ftmwpipeline/cli/report_commands.py
src/ftmwpipeline/cli/review_commands.py
src/ftmwpipeline/cli/run_commands.py
src/ftmwpipeline/cli/scan_commands.py
src/ftmwpipeline/cli/settings_commands.py
src/ftmwpipeline/cli/start_commands.py
src/ftmwpipeline/cli/tau_commands.py
src/ftmwpipeline/cli/timebase_commands.py
src/ftmwpipeline/cli/utils.py
src/ftmwpipeline/cli/window_commands.py
src/ftmwpipeline/core/__init__.py
src/ftmwpipeline/core/data_structures.py
src/ftmwpipeline/core/knob_metadata.py
src/ftmwpipeline/core/noise_settings.py
src/ftmwpipeline/core/peak_detection_settings.py
src/ftmwpipeline/core/peak_shape.py
src/ftmwpipeline/core/settings.py
src/ftmwpipeline/core/settings_framework.py
src/ftmwpipeline/core/stage_fit_settings.py
src/ftmwpipeline/core/start_detection_settings.py
src/ftmwpipeline/core/tau_calibration_settings.py
src/ftmwpipeline/core/window_planning_settings.py
src/ftmwpipeline/fitting/__init__.py
src/ftmwpipeline/fitting/active_ft.py
src/ftmwpipeline/fitting/clock_lattice.py
src/ftmwpipeline/fitting/doublet_alternative.py
src/ftmwpipeline/fitting/peak_model.py
src/ftmwpipeline/fitting/plan_execution.py
src/ftmwpipeline/fitting/residual_rescue.py
src/ftmwpipeline/fitting/residual_screening.py
src/ftmwpipeline/fitting/result_conversion.py
src/ftmwpipeline/fitting/spur_detection.py
src/ftmwpipeline/fitting/tau_calibration.py
src/ftmwpipeline/fitting/timebase_calibration.py
src/ftmwpipeline/fitting/validation.py
src/ftmwpipeline/fitting/window_fit.py
src/ftmwpipeline/io/__init__.py
src/ftmwpipeline/io/_hdf5_helpers.py
src/ftmwpipeline/io/_settings_serialization.py
src/ftmwpipeline/io/acquisition_layout.py
src/ftmwpipeline/io/fid_serialization.py
src/ftmwpipeline/io/fitting_serialization.py
src/ftmwpipeline/io/frequency_calibration_serialization.py
src/ftmwpipeline/io/input_metadata.py
src/ftmwpipeline/io/logging.py
src/ftmwpipeline/io/noise_result_serialization.py
src/ftmwpipeline/io/noise_settings_serialization.py
src/ftmwpipeline/io/peak_detection_settings_serialization.py
src/ftmwpipeline/io/peak_serialization.py
src/ftmwpipeline/io/stage6_review_serialization.py
src/ftmwpipeline/io/stage_fit_settings_serialization.py
src/ftmwpipeline/io/tau_calibration_serialization.py
src/ftmwpipeline/io/tau_calibration_settings_serialization.py
src/ftmwpipeline/io/timebase_serialization.py
src/ftmwpipeline/io/window_planning_settings_serialization.py
src/ftmwpipeline/io/window_serialization.py
src/ftmwpipeline/io/data_loaders/__init__.py
src/ftmwpipeline/io/data_loaders/base.py
src/ftmwpipeline/io/data_loaders/blackchirp.py
src/ftmwpipeline/io/data_loaders/csv.py
src/ftmwpipeline/io/data_loaders/ftmw_hdf5.py
src/ftmwpipeline/io/data_loaders/keysight_mat.py
src/ftmwpipeline/io/data_loaders/registry.py
src/ftmwpipeline/preprocessing/__init__.py
src/ftmwpipeline/preprocessing/coherence_screen.py
src/ftmwpipeline/preprocessing/edge_coherence.py
src/ftmwpipeline/preprocessing/leakage.py
src/ftmwpipeline/preprocessing/noise_estimation.py
src/ftmwpipeline/preprocessing/peak_detection.py
src/ftmwpipeline/preprocessing/start_detection.py
src/ftmwpipeline/preprocessing/window_planning.py
src/ftmwpipeline/presets/__init__.py
src/ftmwpipeline/presets/defaults.yaml
src/ftmwpipeline/utils/__init__.py
src/ftmwpipeline/utils/parallelism.py
src/ftmwpipeline/utils/signal_processing.py
src/ftmwpipeline/visualization/__init__.py
src/ftmwpipeline/visualization/fid_visualization.py
src/ftmwpipeline/visualization/fit_detail.py
src/ftmwpipeline/visualization/fit_visualization.py
src/ftmwpipeline/visualization/noise_visualization.py
src/ftmwpipeline/visualization/peak_visualization.py
src/ftmwpipeline/visualization/report_style.py
src/ftmwpipeline/visualization/spectrum_visualization.py
src/ftmwpipeline/visualization/start_detection_visualization.py
src/ftmwpipeline/visualization/tau_calibration_visualization.py
src/ftmwpipeline/visualization/window_visualization.py