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Contents:

  • Getting Started
  • Example script
  • snpio package
    • Subpackages
      • snpio.filtering package
      • snpio.plotting package
      • snpio.io package
      • snpio.analysis package
      • snpio.read_input package
      • snpio.utils package
      • snpio.popgenstats package
    • Module contents
  • snpio
    • snpio package
      • Subpackages
        • snpio.filtering package
        • snpio.plotting package
        • snpio.io package
        • snpio.analysis package
        • snpio.read_input package
        • snpio.utils package
        • snpio.popgenstats package
      • Module contents
  • Changelog
SNPio
  • snpio package
  • Edit on GitHub

snpio package

Subpackages

  • snpio.filtering package
    • Submodules
    • snpio.filtering.nremover2 module
    • Module contents
  • snpio.plotting package
    • Submodules
    • snpio.plotting.plotting module
    • Module contents
  • snpio.io package
    • Submodules
    • snpio.io.phylip_reader module
    • snpio.io.structure_reader module
    • snpio.io.vcf_reader module
    • Module contents
  • snpio.analysis package
    • Submodules
    • snpio.analysis.genotype_encoder module
    • snpio.analysis.tree_builder module
    • Module contents
  • snpio.read_input package
    • Submodules
    • snpio.read_input.genotype_data module
    • snpio.read_input.popmap_file module
    • Module contents
  • snpio.utils package
    • Submodules
    • snpio.utils.misc module
    • snpio.utils.sequence_tools module
    • Module contents
  • snpio.popgenstats package
    • Submodules
    • snpio.popgenstats.pop_gen_statistics module
    • Module contents

Module contents

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© Copyright 2023, Bradley T. Martin and Tyler K. Chafin.

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