##
## GEMMA Version    = 0.98.5 (2021-08-25)
## Build profile    = /gnu/store/8rvid272yb53bgascf5c468z0jhsyflj-profile
## GCC version      = 13.3.0
## GSL Version      = 2.8
## OpenBlas         = OpenBLAS 0.3.29  - OpenBLAS 0.3.29 DYNAMIC_ARCH NO_AFFINITY Nehalem MAX_THREADS=128
##   arch           = Nehalem
##   threads        = 8
##   parallel type  = threaded
##
## Command Line Input = gemma -bfile /data/tests/fixtures/mouse_hs1940/mouse_hs1940 -k /data/tests/fixtures/mouse_hs1940/mouse_hs1940_kinship.cXX.txt -c /data/tests/fixtures/mouse_hs1940/covariates.txt -lmm 1 -o mouse_hs1940_covar_wald -outdir /data/tests/fixtures/mouse_hs1940 
##
## Date = Thu Feb  5 16:24:08 2026
##
## Summary Statistics:
## number of total individuals = 1940
## number of analyzed individuals = 1410
## number of covariates = 3
## number of phenotypes = 1
## number of total SNPs/var = 12226
## number of analyzed SNPs/var = 10768
## REMLE log-likelihood in the null model = -1582.86
## MLE log-likelihood in the null model = -1584.33
## pve estimate in the null model = 0.608887
## se(pve) in the null model = 0.0328319
## vg estimate in the null model = 1.47748
## ve estimate in the null model = 0.341293
## beta estimate in the null model =   0.00917974  0.00253985  -0.000884065
## se(beta) =   0.018461  0.0363378  0.0242243
##
## Computation Time:
## total computation time = 0.636523 min 
## computation time break down: 
##      time on eigen-decomposition = 0.13003 min 
##      time on calculating UtX = 0.0920677 min 
##      time on optimization = 0.265662 min 
##
